RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SLITRK4Q8IW52 837 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 LMNTD1Q8N9Z9 388 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 FBXO15Q8NCQ5 510 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-227ENST00000548080 WDR48Q8TAF3 677 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 CCDC74BQ96LY2 380 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 CCDC138Q96M89 665 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 TMEM79Q9BSE2 394 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 KIR3DX1Q9H7L2 352 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 UCK1Q9HA47 277 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 VTI1BQ9UEU0 232 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 ASB1Q9Y576 335 aa16.8■□□□□ 0.28
HDAC7-227ENST00000548080 IGHV5-10-1A0A0J9YXX1 117 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 FAM221BA6H8Z2 402 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 TRABD2BA6NFA1 517 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 E2F3O00716 465 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 STK16O75716 305 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 HGFP14210 728 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 BDKRB1P46663 353 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 EPHA4P54764 986 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.79■□□□□ 0.28
HDAC7-227ENST00000548080 AFAP1L2Q8N4X5 818 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 OR4E2Q8NGC2 313 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 OR52E1Q8NGJ3 308 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 FBXL8Q96CD0 374 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 FAR2Q96K12 515 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 TGM7Q96PF1 710 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 MID1IP1Q9NPA3 183 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 SEMA4BQ9NPR2 832 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-227ENST00000548080 OPTCQ9UBM4 332 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 HEBP2Q9Y5Z4 205 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 COLEC10Q9Y6Z7 277 aa16.79■□□□□ 0.28
HDAC7-227ENST00000548080 OR6C74A6NCV1 312 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 C1QTNF9BB2RNN3 333 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 MATN2O00339 956 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 PPP6CO00743 305 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ZNF195O14628 629 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 HDAC3O15379 428 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ZW10O43264 779 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 KIF1CO43896 1103 aaKnown RBP16.78■□□□□ 0.28
HDAC7-227ENST00000548080 CCNT2O60583 730 aaKnown RBP16.78■□□□□ 0.28
HDAC7-227ENST00000548080 C1QTNF9P0C862 333 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 SH3BP2P78314 561 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 GTF2H2Q13888 395 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 C16orf72Q14CZ0 275 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 RBBP7Q16576 425 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 IRGCQ6NXR0 463 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 GOLGA7Q7Z5G4 137 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 RBM12BQ8IXT5 1001 aaKnown RBP16.78■□□□□ 0.28
HDAC7-227ENST00000548080 TEX9Q8N6V9 391 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ATL1Q8WXF7 558 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ZBTB26Q9HCK0 441 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 SATB2Q9UPW6 733 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 TRAF6Q9Y4K3 522 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ANGPTL3Q9Y5C1 460 aa16.78■□□□□ 0.28
HDAC7-227ENST00000548080 ASPMQ8IZT6 3477 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 IGF2RP11717 2491 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 K7EPI3 171 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 CAPN5O15484 640 aaPredicted RBP16.77■□□□□ 0.28
HDAC7-227ENST00000548080 FGF4P08620 206 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 POLR2CP19387 275 aaPredicted RBP16.77■□□□□ 0.28
HDAC7-227ENST00000548080 GDF5P43026 501 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 CAPZBP47756 277 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 ZFP36L1Q07352 338 aaKnown RBP16.77■□□□□ 0.28
HDAC7-227ENST00000548080 CCSMST1Q4G0I0 132 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 TMEM71Q6P5X7 295 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 FAM92BQ6ZTR7 304 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 MAVSQ7Z434 540 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 CLYBLQ8N0X4 340 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 MAGEC3Q8TD91 643 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 AGAP11Q8TF27 550 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 LCN9Q8WX39 176 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 GATA6Q92908 595 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 TMEM74Q96NL1 305 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 PKP4Q99569 1192 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 TRIT1Q9H3H1 467 aaKnown RBP16.77■□□□□ 0.28
HDAC7-227ENST00000548080 MVB12BQ9H7P6 319 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 TNFRSF12AQ9NP84 129 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 STK38LQ9Y2H1 464 aa16.77■□□□□ 0.28
HDAC7-227ENST00000548080 ERICH4A6NGS2 130 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 TMEM233B4DJY2 109 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 MYO1CO00159 1063 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 NDUFS1P28331 727 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 SLC6A12P48065 614 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 IDH3AP50213 366 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 PKNOX1P55347 436 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 EPGNQ6UW88 154 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 C6orf89Q6UWU4 347 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 GPRIN3Q6ZVF9 776 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 LRRC70Q7Z2Q7 622 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 C2orf73Q8N5S3 287 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-227ENST00000548080 OR4D9Q8NGE8 314 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 OR9A1PQ8NGU1 263 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 OR5K2Q8NHB8 316 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 PPM1MQ96MI6 270 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 IL17FQ96PD4 163 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 ZNF382Q96SR6 550 aa16.76■□□□□ 0.27
HDAC7-227ENST00000548080 TMEM121BQ9BXQ6 578 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms