RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 STARD8Q92502 1023 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 TSPAN17Q96FV3 270 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 CYTH2Q99418 400 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 ZFYVE21Q9BQ24 234 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 DPH7Q9BTV6 452 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 DHRS4Q9BTZ2 278 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 NLNQ9BYT8 704 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 CHST8Q9H2A9 424 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 CAB39LQ9H9S4 337 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 MRPS30Q9NP92 439 aaKnown RBP10.47□□□□□ -0.73
GCN1-202ENST00000547263 CCDC177Q9NQR7 707 aaPredicted RBP10.47□□□□□ -0.73
GCN1-202ENST00000547263 TMEM184CQ9NVA4 438 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 ZNF180Q9UJW8 692 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 KCND3Q9UK17 655 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 NBEAQ8NFP9 2946 aa10.47□□□□□ -0.73
GCN1-202ENST00000547263 LOC105369274A0A096LPK9 316 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 TK2O00142 265 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 PHGDHO43175 533 aaKnown RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 KLF7O75840 302 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 MED26O95402 600 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 KLK3P07288 261 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CD1DP15813 335 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 STMN1P16949 149 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 TCN2P20062 427 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 PTPN4P29074 926 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 PHBP35232 272 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 DLSTP36957 453 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 SLC6A12P48065 614 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 ARSFP54793 590 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 ATP6V0D1P61421 351 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CSNK1G2P78368 415 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 MC1RQ01726 317 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CDC20Q12834 499 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 DLG1Q12959 904 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 E2F2Q14209 437 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 USP10Q14694 798 aaKnown RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 SLMAPQ14BN4 828 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 TGFBIQ15582 683 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 LINC00303Q3SY05 128 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 SOWAHCQ53LP3 525 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 PRAMEF13Q5VWM6 474 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 GPR135Q8IZ08 494 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 OR4N4Q8N0Y3 316 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 ATL1Q8WXF7 558 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 KIAA1191Q96A73 305 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 KIAA1143Q96AT1 154 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 PTERQ96BW5 349 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 RHBDF1Q96CC6 855 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 TM4SF19Q96DZ7 209 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CATSPER2Q96P56 530 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 ACAT2Q9BWD1 397 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 TRIM54Q9BYV2 358 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 SLC26A1Q9H2B4 701 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CUEDC1Q9NWM3 386 aaPredicted RBP10.46□□□□□ -0.73
GCN1-202ENST00000547263 TXNDC16Q9P2K2 825 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 COPG2Q9UBF2 871 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 NFU1Q9UMS0 254 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 SNX7Q9UNH6 387 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 SH2B3Q9UQQ2 575 aa10.46□□□□□ -0.73
GCN1-202ENST00000547263 CCDC88CQ9P219 2028 aa10.46□□□□□ -0.74
GCN1-202ENST00000547263 IGLV3-12A0A075B6K2 115 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 NPEPPSL1A6NEC2 478 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 H0YGG7 62 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 DSCR3O14972 297 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 CNOT3O75175 753 aaKnown RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 CREG1O75629 220 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 SYF2O95926 243 aaKnown RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 FURINP09958 794 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 HIST1H2AGP0C0S8 130 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 CCDC166P0CW27 439 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 HIST1H2ADP20671 130 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 GCAP28676 217 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 CRABP2P29373 138 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 KCNC1P48547 511 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 HNMTP50135 292 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 ARF3P61204 181 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 PCDH1Q08174 1060 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 NAE1Q13564 534 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 GRM7Q14831 915 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 NCF4Q15080 339 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 TSNQ15631 228 aaKnown RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 CAPN13Q6MZZ7 669 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 FAM199XQ6PEV8 388 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 COX15Q7KZN9 410 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 VN1R4Q7Z5H5 301 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 SYVN1Q86TM6 617 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 ISCA2Q86U28 154 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 CTAGE3PQ8IX95 158 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 CENPLQ8N0S6 344 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 ZNF655Q8N720 491 aaPredicted RBP10.45□□□□□ -0.74
GCN1-202ENST00000547263 ZSCAN1Q8NBB4 408 aa10.45□□□□□ -0.74
GCN1-202ENST00000547263 PDPRQ8NCN5 879 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms