RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TRMT6Q9UJA5 497 aaKnown RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 SNX12Q9UMY4 172 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 B3GNT3Q9Y2A9 372 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 MAU2Q9Y6X3 613 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 LOC400499M0QZD8 3231 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 KRT87PA6NCN2 255 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 GFYI3L273 518 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SMAPO00193 183 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SOCS6O14544 535 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 DNALI1O14645 258 aaPredicted RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 MAP2K7O14733 419 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 PCDH17O14917 1159 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 HAUS5O94927 633 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 AGFG2O95081 481 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SLC16A8O95907 504 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 ANXA5P08758 320 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 ACPPP15309 386 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 EZRP15311 586 aaKnown RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 FBLP22087 321 aaKnown RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 GNLYP22749 145 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CXCR2P25025 360 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CUL1Q13616 776 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 NDUFA9Q16795 377 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 KCTD19Q17RG1 926 aaPredicted RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 PLEKHN1Q494U1 663 aaPredicted RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 HSP90AA5PQ58FG0 334 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 RNASEH2BQ5TBB1 312 aaKnown RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 ZNF549Q6P9A3 640 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 KIRREL2Q6UWL6 708 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CYHR1Q6ZMK1 362 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 KIAA0408Q6ZU52 694 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 UBE2R2Q712K3 238 aaPredicted RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 COX15Q7KZN9 410 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 ADCK2Q7Z695 626 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 METTL27Q8N6F8 245 aaPredicted RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 Q8NA96 180 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 STT3BQ8TCJ2 826 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CD200R1Q8TD46 325 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 ZNF480Q8WV37 535 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SLCO2A1Q92959 643 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CCDC138Q96M89 665 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 RUNDC3BQ96NL0 473 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 AARSD1Q9BTE6 412 aaKnown RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 YIPF2Q9BWQ6 316 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 EPS8L2Q9H6S3 715 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 GRPEL1Q9HAV7 217 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 LRRC4CQ9HCJ2 640 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SLC6A20Q9NP91 592 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 IARS2Q9NSE4 1012 aaKnown RBP8.93□□□□□ -0.98
YBX3-218ENST00000546298 TMEM184CQ9NVA4 438 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 C14orf105Q9NVL8 296 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 TAS2R13Q9NYV9 303 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 LUZP4Q9P127 313 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 CTSFQ9UBX1 484 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 PCYOX1Q9UHG3 505 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 C3orf18Q9UK00 162 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 MED16Q9Y2X0 877 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 HS3ST3B1Q9Y662 390 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 NBASA2RRP1 2371 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 KALRNO60229 2985 aa8.93□□□□□ -0.98
YBX3-218ENST00000546298 SPTBP11277 2137 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 IGLV3-12A0A075B6K2 115 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 PABPN1LA6NDY0 278 aaKnown RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 SLC16A5O15375 505 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 HPP00738 406 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 C8GP07360 202 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 HIST1H2AGP0C0S8 130 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 ZGLP1P0C6A0 271 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 GP1BBP13224 206 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 HIST1H2ADP20671 130 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 FDXRP22570 491 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 EMP2P54851 167 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 FOXL2P58012 376 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 YBX1P67809 324 aaKnown RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 MPP1Q00013 466 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 KLC1Q07866 573 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 SRSF1Q07955 248 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■□□□□ 10.8
YBX3-218ENST00000546298 SP140Q13342 867 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 DSG2Q14126 1118 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 FAM53BQ14153 422 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 CRYMQ14894 314 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 SPANXN3Q5MJ09 141 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 ZNF425Q6IV72 752 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 Q6ZS92 163 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 SHISA6Q6ZSJ9 500 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 SYDE1Q6ZW31 735 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 CPNE9Q8IYJ1 553 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 PDIK1LQ8N165 341 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 MYO1HQ8N1T3 1032 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 C2CD4AQ8NCU7 369 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 OR11G2Q8NGC1 345 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 GIMAP7Q8NHV1 300 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 PPP4R1Q8TF05 950 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 ANP32BQ92688 251 aaKnown RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 THAP11Q96EK4 314 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 MMABQ96EY8 250 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 HIST1H2AHQ96KK5 128 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 C10orf90Q96M02 699 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 OR2A5Q96R48 311 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms