RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR2A25A4D2G3 310 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 SUPT3HB4E1H0 165 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 GOLGA8RI6L899 631 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 NRP2O60462 931 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 SUPT3HO75486 399 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 KRT15P19012 456 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM164Q5U3C3 297 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 ZNF425Q6IV72 752 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 LCA5Q86VQ0 697 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 BPHLQ86WA6 291 aaPredicted RBP19.67■□□□□ 0.74
HMGA2-211ENST00000545998 MYRIPQ8NFW9 859 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 TSNARE1Q96NA8 513 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 TEFMQ96QE5 360 aaKnown RBP19.67■□□□□ 0.74
HMGA2-211ENST00000545998 PLCD4Q9BRC7 762 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 HAUS8Q9BT25 410 aa19.67■□□□□ 0.74
HMGA2-211ENST00000545998 CUEDC1Q9NWM3 386 aaPredicted RBP19.67■□□□□ 0.74
HMGA2-211ENST00000545998 S100BP04271 92 aaPredicted RBP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 RBP1P09455 135 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 THOC6Q86W42 341 aaKnown RBP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 PAQR7Q86WK9 346 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 PPP1R3BQ86XI6 285 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 OR8K5Q8NH50 307 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 FANCEQ9HB96 536 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 WWOXQ9NZC7 414 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 RARRES3Q9UL19 164 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 SLC22A14Q9Y267 594 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM150CB9EJG8 249 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 MAP2K7O14733 419 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 CTSVO60911 334 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 IPO13O94829 963 aaKnown RBP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 GDF5P43026 501 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 ZNF844Q08AG5 666 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 DEFB110Q30KQ9 67 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 FBXO48Q5FWF7 155 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 C17orf64Q86WR6 236 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 SCYL1Q96KG9 808 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 MRPL57Q9BQC6 102 aaKnown RBP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 CNOT10Q9H9A5 744 aaKnown RBP19.66■□□□□ 0.74
HMGA2-211ENST00000545998 XPR1Q9UBH6 696 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 ACSL6Q9UKU0 697 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 SNX7Q9UNH6 387 aa19.66■□□□□ 0.74
HMGA2-211ENST00000545998 SEC16AO15027 2179 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 H7BY64 318 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 KLK8O60259 260 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 WDR47O94967 919 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 GSTA1P08263 222 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 HRH2P25021 359 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 HSPA7P48741 367 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM151AQ8N4L1 468 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 OR1L3Q8NH93 324 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 UBTD2Q8WUN7 234 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 PRAP1Q96NZ9 151 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 ZIM3Q96PE6 472 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 MRPL46Q9H2W6 279 aaKnown RBP19.65■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM184CQ9NVA4 438 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 PILRAQ9UKJ1 303 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 PLCL2Q9UPR0 1127 aa19.65■□□□□ 0.74
HMGA2-211ENST00000545998 MAP1BP46821 2468 aaKnown RBP19.65■□□□□ 0.74
HMGA2-211ENST00000545998 H3BMH7 237 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 TK2O00142 265 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 STK16O75716 305 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 TIAF1O95411 115 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 SBK3P0C264 359 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 CDH1P12830 882 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 ZC3H12BQ5HYM0 836 aaKnown RBP19.64■□□□□ 0.73
HMGA2-211ENST00000545998 PWWP2BQ6NUJ5 590 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 FBXO42Q6P3S6 717 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 RNF44Q7L0R7 432 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 MCATQ8IVS2 390 aaKnown RBP19.64■□□□□ 0.73
HMGA2-211ENST00000545998 ABHD11Q8NFV4 315 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 FGF11Q92914 225 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 NEIL2Q969S2 332 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 ESAMQ96AP7 390 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 FCRL4Q96PJ5 515 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 CD244Q9BZW8 370 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 SPRY4Q9C004 299 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 TMEM216Q9P0N5 145 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 DCDC2Q9UHG0 476 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 ASB1Q9Y576 335 aa19.64■□□□□ 0.73
HMGA2-211ENST00000545998 URB1O60287 2271 aaKnown RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 TLX3O43711 291 aaPredicted RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 CTSBP07858 339 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 GFAPP14136 432 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 EZRP15311 586 aaKnown RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 KRT4P19013 534 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 AGTR2P50052 363 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 ALDH18A1P54886 795 aaKnown RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 ITGA1P56199 1179 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 RELAQ04206 551 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 PFKFB4Q16877 469 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 ADCK2Q7Z695 626 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 TRABD2AQ86V40 505 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 SLC5A11Q8WWX8 675 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 N4BP2L2Q92802 583 aaPredicted RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 CPSF2Q9P2I0 782 aaKnown RBP19.63■□□□□ 0.73
HMGA2-211ENST00000545998 SERTAD3Q9UJW9 196 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 DYRK1BQ9Y463 629 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 KCNE2Q9Y6J6 123 aa19.63■□□□□ 0.73
HMGA2-211ENST00000545998 HAT1O14929 419 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms