RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 FRG2Q64ET8 278 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 FRG2BQ96QU4 278 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 ZNF334Q9HCZ1 680 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 SSU72Q9NP77 194 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 B3GAT2Q9NPZ5 323 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 ZNF624Q9P2J8 865 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 P2RX2Q9UBL9 471 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 U3KQV3 271 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 CXorf49A8MYA2 514 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 LOC730098B7Z3J9 87 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 DNAJA2O60884 412 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 UGT2B11O75310 529 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 STX11O75558 287 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 COL5A3P25940 1745 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 ZNF41P51814 821 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 STC1P52823 247 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 KRR1Q13601 381 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 C1orf94Q6P1W5 598 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 IMP4Q96G21 291 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 PRTFDC1Q9NRG1 225 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 HEBP1Q9NRV9 189 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 ERGIC3Q9Y282 383 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 SIT1Q9Y3P8 196 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 FAM159BA6NKW6 160 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 DUXAA6NLW8 204 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 AREL1O15033 823 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 MPC1LP0DKB6 136 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 HNRNPA2B1P22626 353 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 CRISP3P54108 245 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 SIM2Q14190 667 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 ZNF234Q14588 700 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 SHHQ15465 462 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 DECR1Q16698 335 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 EIF2S3LQ2VIR3 472 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 RBM20Q5T481 1227 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 EMC10Q5UCC4 262 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 AGTRAPQ6RW13 159 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 DEFB123Q8N688 67 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 C1orf52Q8N6N3 182 aaKnown RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 NATD1Q8N6N6 113 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 UXS1Q8NBZ7 420 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 GLB1L3Q8NCI6 653 aaPredicted RBP8.8□□□□□ -1
MTHFD1-202ENST00000545908 VN1R2Q8NFZ6 395 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 SLC25A36Q96CQ1 311 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 IKZF2Q9UKS7 526 aa8.8□□□□□ -1
MTHFD1-202ENST00000545908 ZNF726A6NNF4 738 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 KHDRBS3O75525 346 aaKnown RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 PAPSS2O95340 614 aaPredicted RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 AHSGP02765 367 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PDX1P52945 283 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 ERVFC1P60507 584 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PITX1P78337 314 aaPredicted RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 LIPEQ05469 1076 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 USF2Q15853 346 aaPredicted RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 TSEN15Q8WW01 171 aaKnown RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 RNF31Q96EP0 1072 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 DNMT3BQ9UBC3 853 aaKnown RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 FETUBQ9UGM5 382 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 HCN4Q9Y3Q4 1203 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 HIDE1A8MVS5 230 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 H0YGN5 161 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 UNC5CO95185 931 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 C8orf89P0DMQ9 161 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 ATP12AP54707 1039 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.79□□□□□ -16e-6■■□□□ 12.4
MTHFD1-202ENST00000545908 ASPGQ86U10 573 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PLXDC1Q8IUK5 500 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 CLDN19Q8N6F1 224 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 MIEF2Q96C03 454 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 MRPL38Q96DV4 380 aaKnown RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 SMCO3A2RU48 225 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 SCGNO76038 276 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 FHP07954 510 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 TNFRSF4P43489 277 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 ARFIP1P53367 373 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PCBP2Q15366 365 aaKnown RBP eCLIP8.79□□□□□ -1
MTHFD1-202ENST00000545908 SNAPC1Q16533 368 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 TBC1D21Q8IYX1 336 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 UMODL1-AS1Q8N2C9 162 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 OR5AK3PQ8NH89 298 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 SLC38A4Q969I6 547 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 GPER1Q99527 375 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 GPATCH1Q9BRR8 931 aaKnown RBP8.79□□□□□ -1
MTHFD1-202ENST00000545908 SLC29A3Q9BZD2 475 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 ALG2Q9H553 416 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 OARD1Q9Y530 152 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 NUMBLQ9Y6R0 609 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 RREB1Q92766 1687 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 FAM234BA2RU67 622 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PRORSD1PA6NEY8 169 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 MANBAO00462 879 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 OR1I1O60431 355 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 RENP00797 406 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 SERPINA1P01009 418 aa8.79□□□□□ -1
MTHFD1-202ENST00000545908 PRDX6P30041 224 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms