RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ENO3P13929 434 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 ARF3P61204 181 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 TAP2Q03519 686 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 FAM214AQ32MH5 1076 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 HSP90AA5PQ58FG0 334 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 KIRREL2Q6UWL6 708 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 CYHR1Q6ZMK1 362 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 KCNMB4Q86W47 210 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 ASB11Q8WXH4 323 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 NACC2Q96BF6 587 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 FAM167BQ9BTA0 163 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 DDX47Q9H0S4 455 aaKnown RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 SLAMF7Q9NQ25 335 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 IARS2Q9NSE4 1012 aaKnown RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 FBXO5Q9UKT4 447 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 DHRS7Q9Y394 339 aa20.15■□□□□ 0.82
SCARB1-210ENST00000545493 MDC1Q14676 2089 aaKnown RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 UTP20O75691 2785 aaKnown RBP20.15■□□□□ 0.82
SCARB1-210ENST00000545493 DOCK10Q96BY6 2186 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 GFYI3L273 518 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 DNALI1O14645 258 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 VPS26AO75436 327 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 HAUS5O94927 633 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ALPPP05187 535 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ERVK-10P10266 1014 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 PGAM1P18669 254 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 IMPA1P29218 277 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 SKIV2L2P42285 1042 aaKnown RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 TIAL1Q01085 375 aaKnown RBP eCLIP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 DHX9Q08211 1270 aaKnown RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 AIMP2Q13155 320 aaKnown RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 PTK6Q13882 451 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 PPP1R7Q15435 360 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 HKDC1Q2TB90 917 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 PRMT9Q6P2P2 845 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 IGFL3Q6UXB1 125 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ARHGEF39Q8N4T4 335 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 CALML6Q8TD86 181 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ZNF304Q9HCX3 659 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ATP13A2Q9NQ11 1180 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 CUEDC1Q9NWM3 386 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 RUVBL1Q9Y265 456 aaKnown RBP20.14■□□□□ 0.81
SCARB1-210ENST00000545493 COMMD10Q9Y6G5 202 aa20.14■□□□□ 0.81
SCARB1-210ENST00000545493 ZNF839A8K0R7 811 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 SMAPO00193 183 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 P2RX6O15547 441 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 CCNDBP1O95273 360 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 SYF2O95926 243 aaKnown RBP20.13■□□□□ 0.81
SCARB1-210ENST00000545493 ITGA3P26006 1051 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 HSD17B2P37059 387 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 PRDX1Q06830 199 aaKnown RBP20.13■□□□□ 0.81
SCARB1-210ENST00000545493 KLC1Q07866 573 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 RBBP7Q16576 425 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 MUM1Q2TAK8 710 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 PLEKHN1Q494U1 663 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-210ENST00000545493 MSS51Q4VC12 460 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 PRAMEF13Q5VWM6 474 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 CSNK1A1LQ8N752 337 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 C2CD4AQ8NCU7 369 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-210ENST00000545493 STT3BQ8TCJ2 826 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 CABS1Q96KC9 395 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 OR2A5Q96R48 311 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 NDNQ99608 321 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 CRB3Q9BUF7 120 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 PLAC1Q9HBJ0 212 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 SEMA3GQ9NS98 782 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
SCARB1-210ENST00000545493 ASIC3Q9UHC3 531 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 CSAG2Q9Y5P2 127 aa20.13■□□□□ 0.81
SCARB1-210ENST00000545493 IGLV3-12A0A075B6K2 115 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 EIF3FO00303 357 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-210ENST00000545493 HAT1O14929 419 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 ZSCAN12O43309 604 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 EZRP15311 586 aaKnown RBP20.12■□□□□ 0.81
SCARB1-210ENST00000545493 FBLP22087 321 aaKnown RBP20.12■□□□□ 0.81
SCARB1-210ENST00000545493 TUBB8Q3ZCM7 444 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 UBE2R2Q712K3 238 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-210ENST00000545493 PRSS58Q8IYP2 241 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 OR11G2Q8NGC1 345 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 SLCO2A1Q92959 643 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 COL26A1Q96A83 441 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 C19orf60Q96EN9 201 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 ABCF3Q9NUQ8 709 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 SLC17A6Q9P2U8 582 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 PCYOX1Q9UHG3 505 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 ADAMTS6Q9UKP5 1117 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 B3GNT3Q9Y2A9 372 aa20.12■□□□□ 0.81
SCARB1-210ENST00000545493 SPTAN1Q13813 2472 aaKnown RBP20.12■□□□□ 0.81
SCARB1-210ENST00000545493 USP27XA6NNY8 438 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 TCP11X1B4DZS4 312 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 FFAR3O14843 346 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 GPR42O15529 346 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 IPO13O94829 963 aaKnown RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 ZGLP1P0C6A0 271 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 GABRB3P28472 473 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 EMP3P54852 163 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 TBPL1P62380 186 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 SNRPNP63162 240 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms