RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 STOX2Q9P2F5 926 aaPredicted RBP13.95□□□□□ -0.18
RTN3-214ENST00000545432 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TRPC4Q9UBN4 977 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 SLC39A10Q9ULF5 831 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 RIMKLBQ9ULI2 386 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 A0A1B0GTL3 188 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 CCDC162PA2VCL2 907 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 OR51F1A6NGY5 319 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 F8W8V4 182 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 H0YGG7 62 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 PHF2O75151 1096 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 C1orf105O95561 183 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 HEXBP07686 556 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 RBP3P10745 1247 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 TPH1P17752 444 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 CD96P40200 585 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 COPS2P61201 443 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 ARF3P61204 181 aaPredicted RBP13.94□□□□□ -0.18
RTN3-214ENST00000545432 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
RTN3-214ENST00000545432 ZNF33BQ06732 778 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 FAM53BQ14153 422 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 TAX1BP1Q86VP1 789 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 TGIF2LYQ8IUE0 185 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
RTN3-214ENST00000545432 ZC3H7AQ8IWR0 971 aaKnown RBP13.94□□□□□ -0.18
RTN3-214ENST00000545432 MMP21Q8N119 569 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 GHDCQ8N2G8 530 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 OR13J1Q8NGT2 312 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 SIGLEC12Q96PQ1 595 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 CHP1Q99653 195 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 NPAS2Q99743 824 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 MIPEPQ99797 713 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 FOXC2Q99958 501 aa13.94□□□□□ -0.18
RTN3-214ENST00000545432 FOXO6A8MYZ6 492 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 AKR1B10O60218 316 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 ZNF189O75820 626 aaPredicted RBP13.93□□□□□ -0.18
RTN3-214ENST00000545432 MBD3O95983 291 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 ERGP11308 486 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 PSMB5P28074 263 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 DNAJA1P31689 397 aaKnown RBP13.93□□□□□ -0.18
RTN3-214ENST00000545432 PTPN7P35236 360 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 MARCKSL1P49006 195 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 YBX1P67809 324 aaKnown RBP13.93□□□□□ -0.18
RTN3-214ENST00000545432 ACVR1Q04771 509 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 PCGF5Q86SE9 256 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 EID3Q8N140 333 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 BEST3Q8N1M1 668 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 LKAAEAR1Q8TD35 194 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 CA5BP1Q8WTZ4 195 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 OR2A5Q96R48 311 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 CYTH2Q99418 400 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 HEMGNQ9BXL5 484 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 NPDC1Q9NQX5 325 aaPredicted RBP13.93□□□□□ -0.18
RTN3-214ENST00000545432 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 CIDEBQ9UHD4 219 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 RUVBL1Q9Y265 456 aaKnown RBP13.93□□□□□ -0.18
RTN3-214ENST00000545432 SCN2AQ99250 2005 aa13.93□□□□□ -0.18
RTN3-214ENST00000545432 NPIPA5E9PKD4 350 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 NEURL1O76050 574 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 STK10O94804 968 aaKnown RBP13.92□□□□□ -0.18
RTN3-214ENST00000545432 METTL18O95568 372 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 APOA4P06727 396 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 POU6F1Q14863 301 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 LRRC8BQ6P9F7 803 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 ZNF534Q76KX8 674 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 CPEB2Q7Z5Q1 589 aaKnown RBP13.92□□□□□ -0.18
RTN3-214ENST00000545432 PAQR7Q86WK9 346 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 DMRTC2Q8IXT2 367 aaPredicted RBP13.92□□□□□ -0.18
RTN3-214ENST00000545432 DNAAF3Q8N9W5 541 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 TMEM178AQ8NBL3 297 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 LILRB4Q8NHJ6 448 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 CFAP61Q8NHU2 1237 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 M1APQ8TC57 530 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 NINJ1Q92982 152 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 SDCCAG3Q96C92 435 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 CABS1Q96KC9 395 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 TTC1Q99614 292 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 PLCD4Q9BRC7 762 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 HES7Q9BYE0 225 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 TRIM45Q9H8W5 580 aaPredicted RBP13.92□□□□□ -0.18
RTN3-214ENST00000545432 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 NPIPA1Q9UND3 350 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 MRFAP1Q9Y605 127 aa13.92□□□□□ -0.18
RTN3-214ENST00000545432 INTS1Q8N201 2190 aaKnown RBP13.92□□□□□ -0.18
RTN3-214ENST00000545432 FBN3Q75N90 2809 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 FFAR3O14843 346 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 GPR42O15529 346 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 PJA2O43164 708 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 TOXO94900 526 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 NADKO95544 446 aaPredicted RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 TSPAN12O95859 305 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 SP1P08047 785 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms