RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ANXA5P08758 320 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 HRH2P25021 359 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 TYK2P29597 1187 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 STAT5AP42229 794 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 SLC6A12P48065 614 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 IRF9Q00978 393 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 ERCC6LQ2NKX8 1250 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 PTCHD3Q3KNS1 767 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 ZNF385CQ66K41 422 aaPredicted RBP18.33■□□□□ 0.52
DDX55-211ENST00000544429 CAPN13Q6MZZ7 669 aaPredicted RBP18.33■□□□□ 0.52
DDX55-211ENST00000544429 C6orf15Q6UXA7 325 aaPredicted RBP18.33■□□□□ 0.52
DDX55-211ENST00000544429 TIFABQ6ZNK6 161 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 TMEM126BQ8IUX1 230 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 CACNA2D3Q8IZS8 1091 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 GALNT6Q8NCL4 622 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 PDPRQ8NCN5 879 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 ABHD11Q8NFV4 315 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 RHEBL1Q8TAI7 183 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 KCTD4Q8WVF5 259 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 PYCR2Q96C36 320 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 NXNL1Q96CM4 212 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 SPRTNQ9H040 489 aaPredicted RBP18.33■□□□□ 0.52
DDX55-211ENST00000544429 SNX7Q9UNH6 387 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 IKBKGQ9Y6K9 419 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 ITPR1Q14643 2758 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 MGAQ8IWI9 3026 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 E7EQ34 232 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 ZNF749O43361 778 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 SRPX2O60687 465 aaPredicted RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 OR2B3O76000 313 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 KLHL2O95198 593 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 MT-ND3P03897 115 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 NTRK1P04629 796 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 SNRPAP09012 282 aaKnown RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 EZRP15311 586 aaKnown RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 TFEBP19484 476 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 ATP1A2P50993 1020 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 GPS2Q13227 327 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 SRSF6Q13247 344 aaKnown RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 TSTA3Q13630 321 aaPredicted RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 FRMPD2BQ6IN97 320 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 TLDC1Q6P9B6 456 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 TAOK1Q7L7X3 1001 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 GPSM1Q86YR5 675 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 CNPY4Q8N129 248 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 OR4K1Q8NGD4 311 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 STAG3L4Q8TBR4 150 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 MZB1Q8WU39 189 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 MED8Q96G25 268 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 OR2A5Q96R48 311 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 CCNL2Q96S94 520 aaPredicted RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 ZFYVE21Q9BQ24 234 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 HAUS8Q9BT25 410 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 AKIRIN1Q9H9L7 192 aaPredicted RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 PCMTD2Q9NV79 361 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 TMEM184CQ9NVA4 438 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX55-211ENST00000544429 PTBP2Q9UKA9 531 aaKnown RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 RAB21Q9UL25 225 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 AP1M2Q9Y6Q5 423 aa18.32■□□□□ 0.52
DDX55-211ENST00000544429 V9GYY5 206 aaPredicted RBP18.32■□□□□ 0.52
DDX55-211ENST00000544429 LOC101059948A0A1B0GTJ6 334 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 PABPN1LA6NDY0 278 aaKnown RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 TRIM49D1C9J1S8 452 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 TAPBPO15533 448 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 ZSCAN9O15535 394 aaPredicted RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 KERAO60938 352 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 RFPL1O75677 317 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 SHBGP04278 402 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 MTHFD2P13995 350 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 WT1P19544 449 aaPredicted RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 UCNP55089 124 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 CSNK1G2P78368 415 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 ACAP2Q15057 778 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 RASA2Q15283 850 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 FAM83EQ2M2I3 478 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 TAF1BQ53T94 588 aaPredicted RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 THEMIS2Q5TEJ8 643 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 RHBDD2Q6NTF9 364 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 FRA10AC1Q70Z53 315 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 GPR135Q8IZ08 494 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 DSELQ8IZU8 1212 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 PLD6Q8N2A8 252 aaKnown RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 CAVIN3Q969G5 261 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 MTBPQ96DY7 904 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 TMEM79Q9BSE2 394 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 SARGQ9BW04 601 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 ALG9Q9H6U8 611 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 ACTR5Q9H9F9 607 aaPredicted RBP18.31■□□□□ 0.52
DDX55-211ENST00000544429 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 TLK1Q9UKI8 766 aa18.31■□□□□ 0.52
DDX55-211ENST00000544429 KCNE1BA0A087WTH5 132 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 LOC105369274A0A096LPK9 316 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 LOC102723532A0A0G2JNH3 316 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 H7BY64 318 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 KRT37O76014 449 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 COL6A2P12110 1019 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 LIFP15018 202 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms