RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TLE6Q9H808 572 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 HSPB11Q9Y547 144 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 CEP152O94986 1710 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 TEX13DA0A0J9YY54 714 aaPredicted RBP15.09■□□□□ 0.01
CHD4-210ENST00000544040 TBX10O75333 385 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 CSTBP04080 98 aaKnown RBP15.09■□□□□ 0.01
CHD4-210ENST00000544040 KLK1P06870 262 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 PRKACGP22612 351 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
CHD4-210ENST00000544040 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 LRRC57Q8N9N7 239 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 OR5T2Q8NGG2 359 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 FBXL20Q96IG2 436 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 HIPK3Q9H422 1215 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 ITM2CQ9NQX7 267 aa15.09■□□□□ 0.01
CHD4-210ENST00000544040 BAZ2BQ9UIF8 2168 aaKnown RBP15.08■□□□□ 0.01
CHD4-210ENST00000544040 POP4O95707 220 aaKnown RBP15.08■□□□□ 0.01
CHD4-210ENST00000544040 MSL3P1P0C860 447 aa15.08■□□□□ 0.01
CHD4-210ENST00000544040 PVALBP20472 110 aaPredicted RBP15.08■□□□□ 0.01
CHD4-210ENST00000544040 LMO2P25791 158 aa15.08■□□□□ 0.01
CHD4-210ENST00000544040 HAGHLQ6PII5 290 aaPredicted RBP15.08■□□□□ 0.01
CHD4-210ENST00000544040 TFAP2BQ92481 460 aa15.08■□□□□ 0.01
CHD4-210ENST00000544040 SLC15A5A6NIM6 579 aa15.08■□□□□ 0
CHD4-210ENST00000544040 CYP17A1P05093 508 aa15.08■□□□□ 0
CHD4-210ENST00000544040 GADD45AP24522 165 aa15.08■□□□□ 0
CHD4-210ENST00000544040 MPIP34949 423 aa15.08■□□□□ 0
CHD4-210ENST00000544040 ERVK-8P63133 956 aa15.08■□□□□ 0
CHD4-210ENST00000544040 S100A12P80511 92 aa15.08■□□□□ 0
CHD4-210ENST00000544040 AADACL4Q5VUY2 407 aa15.08■□□□□ 0
CHD4-210ENST00000544040 DTX3Q8N9I9 347 aa15.08■□□□□ 0
CHD4-210ENST00000544040 AQP11Q8NBQ7 271 aa15.08■□□□□ 0
CHD4-210ENST00000544040 HEPHQ9BQS7 1158 aa15.08■□□□□ 0
CHD4-210ENST00000544040 NANSQ9NR45 359 aa15.08■□□□□ 0
CHD4-210ENST00000544040 MTMR10Q9NXD2 777 aa15.08■□□□□ 0
CHD4-210ENST00000544040 PADI2Q9Y2J8 665 aa15.08■□□□□ 0
CHD4-210ENST00000544040 ST14Q9Y5Y6 855 aa15.08■□□□□ 0
CHD4-210ENST00000544040 CLIC1O00299 241 aa15.08■□□□□ 0
CHD4-210ENST00000544040 OR5M3Q8NGP4 307 aa15.08■□□□□ 0
CHD4-210ENST00000544040 PPTC7Q8NI37 304 aa15.08■□□□□ 0
CHD4-210ENST00000544040 OR52B2Q96RD2 323 aa15.08■□□□□ 0
CHD4-210ENST00000544040 ZCCHC3Q9NUD5 404 aaKnown RBP15.08■□□□□ 0
CHD4-210ENST00000544040 TCRBV7S3A2A0A539 114 aa15.08■□□□□ 0
CHD4-210ENST00000544040 K7EPI3 171 aa15.08■□□□□ 0
CHD4-210ENST00000544040 ESR1P03372 595 aa15.08■□□□□ 0
CHD4-210ENST00000544040 HCKP08631 526 aa15.08■□□□□ 0
CHD4-210ENST00000544040 GNAZP19086 355 aa15.08■□□□□ 0
CHD4-210ENST00000544040 RPS3P23396 243 aaKnown RBP eCLIP15.08■□□□□ 02e-6■■■■□ 25.3
CHD4-210ENST00000544040 RPP38P78345 283 aaKnown RBP15.08■□□□□ 0
CHD4-210ENST00000544040 RIN1Q13671 783 aa15.08■□□□□ 0
CHD4-210ENST00000544040 SLBPQ14493 270 aaKnown RBP eCLIP15.08■□□□□ 0
CHD4-210ENST00000544040 C1orf94Q6P1W5 598 aa15.08■□□□□ 0
CHD4-210ENST00000544040 TDRPQ86YL5 185 aa15.08■□□□□ 0
CHD4-210ENST00000544040 ZNF565Q8N9K5 539 aa15.08■□□□□ 0
CHD4-210ENST00000544040 KLHL6Q8WZ60 621 aa15.08■□□□□ 0
CHD4-210ENST00000544040 NIPSNAP2O75323 286 aa15.08■□□□□ 0
CHD4-210ENST00000544040 MTFR2Q6P444 385 aa15.08■□□□□ 0
CHD4-210ENST00000544040 VSTM1Q6UX27 236 aa15.08■□□□□ 0
CHD4-210ENST00000544040 RHCGQ9UBD6 479 aa15.08■□□□□ 0
CHD4-210ENST00000544040 MEGF6O75095 1541 aa15.07■□□□□ 0
CHD4-210ENST00000544040 GJA1P17302 382 aa15.07■□□□□ 0
CHD4-210ENST00000544040 CBLP22681 906 aa15.07■□□□□ 0
CHD4-210ENST00000544040 PBX3P40426 434 aa15.07■□□□□ 0
CHD4-210ENST00000544040 RHBDL3P58872 404 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ZNF227Q86WZ6 799 aa15.07■□□□□ 0
CHD4-210ENST00000544040 TBC1D14Q9P2M4 693 aa15.07■□□□□ 0
CHD4-210ENST00000544040 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ROBO3Q96MS0 1386 aa15.07■□□□□ 0
CHD4-210ENST00000544040 LCN1P31025 176 aa15.07■□□□□ 0
CHD4-210ENST00000544040 NDST2P52849 883 aa15.07■□□□□ 0
CHD4-210ENST00000544040 TMEM44Q2T9K0 475 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ARSKQ6UWY0 536 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ABHD15Q6UXT9 468 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ZNF611Q8N823 705 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ZNF641Q96N77 438 aaPredicted RBP15.07■□□□□ 0
CHD4-210ENST00000544040 GPR20Q99678 358 aa15.07■□□□□ 0
CHD4-210ENST00000544040 P2RX2Q9UBL9 471 aa15.07■□□□□ 0
CHD4-210ENST00000544040 CFAP20Q9Y6A4 193 aaKnown RBP15.07■□□□□ 0
CHD4-210ENST00000544040 TREHO43280 583 aa15.07■□□□□ 0
CHD4-210ENST00000544040 MTX2O75431 263 aa15.07■□□□□ 0
CHD4-210ENST00000544040 NSG1P42857 185 aa15.07■□□□□ 0
CHD4-210ENST00000544040 FXYD6P3P58550 94 aa15.07■□□□□ 0
CHD4-210ENST00000544040 VMACQ2NL98 169 aa15.07■□□□□ 0
CHD4-210ENST00000544040 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
CHD4-210ENST00000544040 ASB9Q96DX5 294 aa15.07■□□□□ 0
CHD4-210ENST00000544040 MTFR1LQ9H019 292 aa15.07■□□□□ 0
CHD4-210ENST00000544040 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
CHD4-210ENST00000544040 A0A1B0GVM2 712 aa15.07■□□□□ 0
CHD4-210ENST00000544040 TRBC2A0A5B9 178 aa15.07■□□□□ 0
CHD4-210ENST00000544040 RPL17P18621 184 aaKnown RBP15.07■□□□□ 0
CHD4-210ENST00000544040 GGT5P36269 586 aa15.07■□□□□ 0
CHD4-210ENST00000544040 CAPZA1P52907 286 aa15.07■□□□□ 0
CHD4-210ENST00000544040 PNLIPRP1P54315 467 aa15.07■□□□□ 0
CHD4-210ENST00000544040 PAQR3Q6TCH7 311 aa15.07■□□□□ 0
CHD4-210ENST00000544040 PAMR1Q6UXH9 720 aa15.07■□□□□ 0
CHD4-210ENST00000544040 ZNF649Q9BS31 505 aa15.07■□□□□ 0
CHD4-210ENST00000544040 TBL1XR1Q9BZK7 514 aa15.07■□□□□ 0
CHD4-210ENST00000544040 FLRT1Q9NZU1 646 aa15.07■□□□□ 0
CHD4-210ENST00000544040 POFUT2Q9Y2G5 429 aa15.07■□□□□ 0
CHD4-210ENST00000544040 CARNS1A5YM72 827 aa15.07■□□□□ 0
CHD4-210ENST00000544040 TLX2O43763 284 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms