RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SPAG7O75391 227 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 CDH1P12830 882 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 CREB1P16220 341 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 TAC1P20366 129 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 SHC2P98077 582 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 MC2RQ01718 297 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 NAA25Q14CX7 972 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 GPR19Q15760 415 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 SLC5A11Q8WWX8 675 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 PHF21BQ96EK2 531 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 PRR11Q96HE9 360 aaPredicted RBP13.09□□□□□ -0.31
SP140-213ENST00000543928 PRAP1Q96NZ9 151 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 OR6C1Q96RD1 312 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 CHRNA10Q9GZZ6 450 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
SP140-213ENST00000543928 C12orf65Q9H3J6 166 aaKnown RBP13.09□□□□□ -0.31
SP140-213ENST00000543928 DNAJC11Q9NVH1 559 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 ANGPTL2Q9UKU9 493 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 SNX7Q9UNH6 387 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 PCDHGA8Q9Y5G5 932 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 KCNE2Q9Y6J6 123 aa13.09□□□□□ -0.31
SP140-213ENST00000543928 OR2A25A4D2G3 310 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 LRRC14BA6NHZ5 514 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 A8MT66 165 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 STX16-NPEPL1H3BU86 382 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 AGPSO00116 658 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 STX16O14662 325 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 HCRTR1O43613 425 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 PLIN3O60664 434 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 CTSVO60911 334 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 TNFSF15O95150 251 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 SIX3O95343 332 aaPredicted RBP13.08□□□□□ -0.32
SP140-213ENST00000543928 PROCP04070 461 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 HRH2P25021 359 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 ACY1Q03154 408 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 CDC16Q13042 620 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 TUBB3Q13509 450 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 PCBP2Q15366 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
SP140-213ENST00000543928 PDK4Q16654 411 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 DEFB110Q30KQ9 67 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 CCDC153Q494R4 210 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 LRRC70Q7Z2Q7 622 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 EXOC3L1Q86VI1 746 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 PAQR7Q86WK9 346 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 DNAJC22Q8N4W6 341 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 SNX31Q8N9S9 440 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 NEIL2Q969S2 332 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 PMEPA1Q969W9 287 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 NXPE2Q96DL1 559 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 CTRCQ99895 268 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 STMN4Q9H169 189 aaPredicted RBP13.08□□□□□ -0.32
SP140-213ENST00000543928 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 APMAPQ9HDC9 416 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 FBXO8Q9NRD0 319 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 FGF21Q9NSA1 209 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 TMEM184CQ9NVA4 438 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 OPTCQ9UBM4 332 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 TNPO3Q9Y5L0 923 aaKnown RBP13.08□□□□□ -0.32
SP140-213ENST00000543928 AK5Q9Y6K8 562 aa13.08□□□□□ -0.32
SP140-213ENST00000543928 CEP295Q9C0D2 2601 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 A0A0J9YVX5 310 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 TMEM150CB9EJG8 249 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 K7EPI3 171 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 POLR1CO15160 346 aaPredicted RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 DLX3O60479 287 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 MSL3P1P0C860 447 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 GNAZP19086 355 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 ATP5F1P24539 256 aaPredicted RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 RBMS1P29558 406 aaKnown RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 EEF1DP29692 281 aaKnown RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 GABRA4P48169 554 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 CCR8P51685 355 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 RAB15P59190 212 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 CSNK1G2P78368 415 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 RTP5Q14D33 572 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 ZC3H12BQ5HYM0 836 aaKnown RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 CATSPEREQ5SY80 951 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 TMPRSS11BQ86T26 416 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 LSMEM2Q8N112 164 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 CCDC63Q8NA47 563 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 ABHD11Q8NFV4 315 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 TCP10LQ8TDR4 215 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 N4BP2L2Q92802 583 aaPredicted RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 USP7Q93009 1102 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
SP140-213ENST00000543928 SLC46A1Q96NT5 459 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 FCRL4Q96PJ5 515 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 TAAR9Q96RI9 348 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 CAPS2Q9BXY5 557 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 FANCEQ9HB96 536 aa13.07□□□□□ -0.32
SP140-213ENST00000543928 GPRC5BQ9NZH0 403 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms