RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 RELAQ04206 551 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 MRPL49Q13405 166 aaKnown RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 DSG2Q14126 1118 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 NR6A1Q15406 480 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 LONRF1Q17RB8 773 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 C4orf17Q53FE4 359 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 GARNL3Q5VVW2 1013 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 ICE2Q659A1 982 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 B3GNTL1Q67FW5 361 aaPredicted RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 CENPUQ71F23 418 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 CISD2Q8N5K1 135 aaKnown RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 CSNK1A1LQ8N752 337 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 OR11G2Q8NGC1 345 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 SERPINB12Q96P63 405 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 ASF1BQ9NVP2 202 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 CCDC88CQ9P219 2028 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 LOC105369274A0A096LPK9 316 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 LOC102723532A0A0G2JNH3 316 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 H0YGG7 62 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 SMAPO00193 183 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 ZBTB14O43829 449 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 SLC16A8O95907 504 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 SYF2O95926 243 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 MPC1LP0DKB6 136 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 CXCR2P25025 360 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 GLRBP48167 497 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 CLCN7P51798 805 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 ARF3P61204 181 aaPredicted RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 CCZ1BP86790 482 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 KLC1Q07866 573 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 EIF2S3LQ2VIR3 472 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 THEMIS2Q5TEJ8 643 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 CCDC137Q6PK04 289 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 SUSD1Q6UWL2 747 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 IGFL2Q6UWQ7 119 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 ADCK2Q7Z695 626 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 PAQR7Q86WK9 346 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 OR4N4Q8N0Y3 316 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 C19orf60Q96EN9 201 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 THOC3Q96J01 351 aaKnown RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 PKP4Q99569 1192 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 FAM167BQ9BTA0 163 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 C20orf96Q9NUD7 363 aaPredicted RBP12.51□□□□□ -0.41
RTN3-212ENST00000543123 TAC3Q9UHF0 121 aa12.51□□□□□ -0.41
RTN3-212ENST00000543123 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 GOLGA8MH3BSY2 632 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 SEMA7AO75326 666 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 CBX6O95503 412 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 UQCRHP07919 91 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 HRH2P25021 359 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 COILP38432 576 aaPredicted RBP12.5□□□□□ -0.41
RTN3-212ENST00000543123 SLC1A2P43004 574 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 TSFMP43897 325 aaKnown RBP12.5□□□□□ -0.41
RTN3-212ENST00000543123 FNTAP49354 379 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 PTK6Q13882 451 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 TLR1Q15399 786 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 CYP1B1Q16678 543 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 NDUFA9Q16795 377 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 UGT3A1Q6NUS8 523 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 TTC27Q6P3X3 843 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 PARP9Q8IXQ6 854 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 DNAJB14Q8TBM8 379 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 ZNF480Q8WV37 535 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 ASB11Q8WXH4 323 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 DRC3Q9H069 523 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 MKKSQ9NPJ1 570 aaPredicted RBP12.5□□□□□ -0.41
RTN3-212ENST00000543123 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
RTN3-212ENST00000543123 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
RTN3-212ENST00000543123 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
RTN3-212ENST00000543123 DHRS7Q9Y394 339 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms