RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 GFYI3L273 518 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 PCDH17O14917 1159 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 MED26O95402 600 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 SLC16A8O95907 504 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 FBLP22087 321 aaKnown RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ITGA3P26006 1051 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 SKIV2L2P42285 1042 aaKnown RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 OR1D4P47884 311 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 OCA2Q04671 838 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 PRDX1Q06830 199 aaKnown RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 DSG2Q14126 1118 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 IRAK1BP1Q5VVH5 260 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 KIRREL2Q6UWL6 708 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 IGFL2Q6UWQ7 119 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 Q6ZS92 163 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 PPIL6Q8IXY8 311 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 OR4N4Q8N0Y3 316 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 GABPB2Q8TAK5 448 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 CD200R1Q8TD46 325 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF480Q8WV37 535 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ASB11Q8WXH4 323 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 OSBPL9Q96SU4 736 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 SLC30A3Q99726 388 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 WDR77Q9BQA1 342 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 CRB3Q9BUF7 120 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ACAT2Q9BWD1 397 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ILKAPQ9H0C8 392 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 FBXO6Q9NRD1 293 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 C14orf105Q9NVL8 296 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 LUZP4Q9P127 313 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 ZC3H7BQ9UGR2 993 aaKnown RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 TAC3Q9UHF0 121 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 CDC14AQ9UNH5 594 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 PRRC2CQ9Y520 2896 aaKnown RBP14.91□□□□□ -0.02
VPS33A-206ENST00000542310 NBPF19A0A087WUL8 3843 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 ICE1Q9Y2F5 2266 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 A0A1W2PQ72 361 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 BLACEA4D250 179 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 E7ENX8 843 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 H0YGG7 62 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 GOLGA8MH3BSY2 632 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 TXNDC9O14530 226 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 AGFG2O95081 481 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 HPP00738 406 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 ZGLP1P0C6A0 271 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 ARF3P61204 181 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 TAP2Q03519 686 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 CTBP1Q13363 440 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 PTK6Q13882 451 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 KCTD19Q17RG1 926 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 PLEKHN1Q494U1 663 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 RNASEH2BQ5TBB1 312 aaKnown RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 AGAP7PQ5VUJ5 663 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 FBXO42Q6P3S6 717 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF549Q6P9A3 640 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 SUSD1Q6UWL2 747 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 TMEM151BQ8IW70 566 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 AGGF1Q8N302 714 aaeCLIP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 METTL27Q8N6F8 245 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 CSNK1A1LQ8N752 337 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 OR11G2Q8NGC1 345 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 STT3BQ8TCJ2 826 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 SLCO2A1Q92959 643 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 RERGQ96A58 199 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 MIEF2Q96C03 454 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 CABS1Q96KC9 395 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 SIGLEC10Q96LC7 697 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 AGAP4Q96P64 663 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 EBNA1BP2Q99848 306 aaKnown RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 AARSD1Q9BTE6 412 aaKnown RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 LHPPQ9H008 270 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 C20orf96Q9NUD7 363 aaPredicted RBP14.9□□□□□ -0.02
VPS33A-206ENST00000542310 FBXO5Q9UKT4 447 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 PCDHGA10Q9Y5H3 936 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 MAD1L1Q9Y6D9 718 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 MAU2Q9Y6X3 613 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 CPAMD8Q8IZJ3 1885 aa14.9□□□□□ -0.02
VPS33A-206ENST00000542310 TCP11X1B4DZS4 312 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 SMAPO00193 183 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 MAP2K7O14733 419 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 ZBTB14O43829 449 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 TTC4O95801 387 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 EIF2S1P05198 315 aaKnown RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 ACPPP15309 386 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 PGAM1P18669 254 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 HRH2P25021 359 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 YBX1P67809 324 aaKnown RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 KLC1Q07866 573 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 SP140Q13342 867 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 CUL1Q13616 776 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 CRB2Q5IJ48 1285 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 UGT3A1Q6NUS8 523 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 KCNMB4Q86W47 210 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 LRRC56Q8IYG6 542 aaPredicted RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 SLC35F6Q8N357 371 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 ARHGEF39Q8N4T4 335 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 SSC4DQ8WTU2 575 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms