RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZCWPW2A0A1B0GU75 182 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 FOXS1O43638 330 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 IPO13O94829 963 aaKnown RBP18.92■□□□□ 0.62
DDX11-220ENST00000542244 FKBP9O95302 570 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ESR1P03372 595 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ATP5DP30049 168 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 MAGEA6P43360 314 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 CCZ1BP86790 482 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 CCZ1P86791 482 aaPredicted RBP18.92■□□□□ 0.62
DDX11-220ENST00000542244 ANKRD20A4Q4UJ75 823 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 AGAP7PQ5VUJ5 663 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ATG9BQ674R7 924 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 FAAH2Q6GMR7 532 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ZNF425Q6IV72 752 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 C4orf22Q6V702 233 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 CYHR1Q6ZMK1 362 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ZNF662Q6ZS27 426 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 LRRC56Q8IYG6 542 aaPredicted RBP18.92■□□□□ 0.62
DDX11-220ENST00000542244 AMER3Q8N944 861 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ZNF480Q8WV37 535 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ZNF669Q96BR6 464 aaPredicted RBP18.92■□□□□ 0.62
DDX11-220ENST00000542244 MIEF2Q96C03 454 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 CABS1Q96KC9 395 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 FOPNLQ96NB1 174 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 AGAP4Q96P64 663 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 OR2A5Q96R48 311 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 LHPPQ9H008 270 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 MRPS30Q9NP92 439 aaKnown RBP18.92■□□□□ 0.62
DDX11-220ENST00000542244 SEMA3GQ9NS98 782 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 PLA2G3Q9NZ20 509 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 ZKSCAN5Q9Y2L8 839 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 NEU2Q9Y3R4 380 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 FAM169AQ9Y6X4 670 aa18.92■□□□□ 0.62
DDX11-220ENST00000542244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 IGLV3-12A0A075B6K2 115 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 SLC16A8O95907 504 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 F10P00742 488 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 KRT14P02533 472 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 COX6A1P12074 109 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 OGNP20774 298 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 FBLP22087 321 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 CMPK1P30085 196 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 PNLIPRP1P54315 467 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 ADARP55265 1226 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 MAT1AQ00266 395 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 CDK16Q00536 496 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 EEF1A2Q05639 463 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 ZNF470Q6ECI4 717 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 CASC4Q6P4E1 433 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 CSNK1A1LQ8N752 337 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 PPP4R1Q8TF05 950 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 SMPDL3AQ92484 453 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 TM9SF4Q92544 642 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 NACC2Q96BF6 587 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 TCF12Q99081 682 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 ZNF282Q9UDV7 671 aaPredicted RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 NXT1Q9UKK6 140 aaKnown RBP18.91■□□□□ 0.62
DDX11-220ENST00000542244 SH2B3Q9UQQ2 575 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 CROCCQ5TZA2 2017 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 DOPEY1Q5JWR5 2465 aa18.91■□□□□ 0.62
DDX11-220ENST00000542244 E7ENX8 843 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 HAT1O14929 419 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 KIF5CO60282 957 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 USP1O94782 785 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 DDAH2O95865 285 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 CCDC175P0C221 793 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 VARSP26640 1264 aaKnown RBP18.9■□□□□ 0.62
DDX11-220ENST00000542244 RPA3P35244 121 aaPredicted RBP18.9■□□□□ 0.62
DDX11-220ENST00000542244 MPP1Q00013 466 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 TAP2Q03519 686 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 DHX34Q14147 1143 aaKnown RBP18.9■□□□□ 0.62
DDX11-220ENST00000542244 RNF187Q5TA31 235 aaPredicted RBP18.9■□□□□ 0.62
DDX11-220ENST00000542244 ICE2Q659A1 982 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 MACROD1Q9BQ69 325 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 TRPC4Q9UBN4 977 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 PCYOX1Q9UHG3 505 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 SLC5A6Q9Y289 635 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 NOTCH2Q04721 2471 aa18.9■□□□□ 0.62
DDX11-220ENST00000542244 A0A0A6YYC8 382 aaPredicted RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 H3BMM5 538 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 I3L1I5 382 aaPredicted RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 AP3B1O00203 1094 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 JRKO75564 520 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 HPP00738 406 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 ACPPP15309 386 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 DCTP40126 519 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 SLC1A2P43004 574 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 PGGT1BP53609 377 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 TIAL1Q01085 375 aaKnown RBP eCLIP18.89■□□□□ 0.61
DDX11-220ENST00000542244 OCA2Q04671 838 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 PRDX1Q06830 199 aaKnown RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 ZNF169Q14929 603 aaPredicted RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 MUM1Q2TAK8 710 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 B3GNTL1Q67FW5 361 aaPredicted RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 PRMT9Q6P2P2 845 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 PRSS41Q7RTY9 318 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 MAMDC2Q7Z304 686 aaPredicted RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 PIWIL4Q7Z3Z4 852 aaKnown RBP18.89■□□□□ 0.61
DDX11-220ENST00000542244 LRRC8AQ8IWT6 810 aa18.89■□□□□ 0.61
DDX11-220ENST00000542244 RAB42Q8N4Z0 105 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms