RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RFFLQ8WZ73 363 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 SLC9A6Q92581 669 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 SDCCAG3Q96C92 435 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 TBATAQ96M53 351 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 LENG8Q96PV6 779 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-220ENST00000541963 PSKH2Q96QS6 385 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 PANX2Q96RD6 677 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 WDR24Q96S15 920 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF670Q9BS34 389 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 EBF2Q9HAK2 575 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 PDFQ9HBH1 243 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 NDUFAF4Q9P032 175 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 LPAR3Q9UBY5 353 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 AMFRQ9UKV5 643 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 C19orf53Q9UNZ5 99 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-220ENST00000541963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
CPSF7-220ENST00000541963 CHD5Q8TDI0 1954 aa5.34□□□□□ -1.55
CPSF7-220ENST00000541963 PIEZO1Q92508 2521 aa5.34□□□□□ -1.56
CPSF7-220ENST00000541963 RIF1Q5UIP0 2472 aaKnown RBP5.34□□□□□ -1.56
CPSF7-220ENST00000541963 NYNRINQ9P2P1 1898 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 MED19A0JLT2 244 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 LRRD1A4D1F6 860 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 NEMP2A6NFY4 417 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 IGLON5A6NGN9 336 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF487B1APH4 448 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 C10orf142B7Z368 130 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 EIF3FO00303 357 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 MATN3O15232 486 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 INSIG1O15503 277 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ATP8B1O43520 1251 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TNFSF14O43557 240 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 LCA5LO95447 670 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ESRRBO95718 433 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 WNT1P04628 370 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 NPSP0C0P6 89 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ALPPL2P10696 532 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CYP2A6P11509 494 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 PRLRP16471 622 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CA4P22748 312 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 IL4RP24394 825 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CETN2P41208 172 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 GRIA3P42263 894 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 MMP13P45452 471 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 RABIFP47224 123 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ARSEP51690 589 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 THOP1P52888 689 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 HADHBP55084 474 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 YPEL5P62699 121 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 SIM1P81133 766 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TXNL4AP83876 142 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 E2F1Q01094 437 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 BNC1Q01954 994 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 SLC10A7Q0GE19 358 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TFDP2Q14188 446 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 DPYSL3Q14195 570 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 PAFAH1B3Q15102 231 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 UGP2Q16851 508 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TMEM52BQ4KMG9 183 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 SEL1L3Q68CR1 1132 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TXNRD3NBQ6F5E7 133 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CCDC144NLQ6NUI1 221 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ANKRD16Q6P6B7 361 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 Q6ZSR6 202 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 GLRX5Q86SX6 157 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 TRABD2AQ86V40 505 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 NPWQ8N729 165 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CCNYQ8ND76 341 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 DENND6BQ8NEG7 585 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ACTRT2Q8TDY3 377 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 KLK6Q92876 244 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 RFKQ969G6 155 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 REXO5Q96IC2 774 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 FAR2Q96K12 515 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 RNF157Q96PX1 679 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 NUDCD1Q96RS6 583 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 CCDC134Q9H6E4 229 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 IL21RQ9HBE5 538 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 LIN7CQ9NUP9 197 aaKnown RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 LHX3Q9UBR4 397 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 AMACRQ9UHK6 382 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 ANGPTL2Q9UKU9 493 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 BAG5Q9UL15 447 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 EPN1Q9Y6I3 576 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-220ENST00000541963 PCDH15Q96QU1 1955 aa5.33□□□□□ -1.56
CPSF7-220ENST00000541963 NUMA1Q14980 2115 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 EP300Q09472 2414 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 SPAARA0A1B0GVQ0 90 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TSPAN11A1L157 253 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PSTPIP1O43586 416 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 SOCS5O75159 536 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PIGNO95427 931 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 LDOC1O95751 146 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CD48P09326 243 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 EBLN1P0CF75 366 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TNNT1P13805 278 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CCNB1P14635 433 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TCF4P15884 667 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CALRP27797 417 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms