RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CD93Q9NPY3 652 aa4.01□□□□□ -1.77
SNHG1-217ENST00000541578 COMMD8Q9NX08 183 aa4.01□□□□□ -1.77
SNHG1-217ENST00000541578 IL19Q9UHD0 177 aa4.01□□□□□ -1.77
SNHG1-217ENST00000541578 MTF2Q9Y483 593 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-217ENST00000541578 RAI2Q9Y5P3 530 aa4.01□□□□□ -1.77
SNHG1-217ENST00000541578 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-217ENST00000541578 USP47Q96K76 1375 aa4.01□□□□□ -1.77
SNHG1-217ENST00000541578 TTC21AQ8NDW8 1320 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 LRRC37A3O60309 1634 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TRPM1Q7Z4N2 1603 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RNF103-CHMP3A0A140T963 221 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 HYKKA2RU49 373 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 OR2M5A3KFT3 312 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NEMP2A6NFY4 417 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 HEPACAM2A8MVW5 462 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 C19orf81C9J6K1 198 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TMEM178BH3BS89 294 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RNF103O00237 685 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PPIP5K2O43314 1243 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RPS6KA5O75582 802 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE7O76087 117 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 DDNO94850 711 aaPredicted RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 CAMTA2O94983 1202 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 REC8O95072 547 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GCNT3O95395 438 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 OLFM2O95897 454 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 C9P02748 559 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PRSS2P07478 247 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 KRT19P08727 400 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 SBK2P0C263 348 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE12FP0CL80 117 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE12GP0CL81 117 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE12IP0CL82 117 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 CYP11B2P19099 503 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 CD22P20273 847 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TMPOP42166 694 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 NPBWR1P48145 328 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 AMTP48728 403 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RGS19P49795 217 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RGS7P49802 495 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 KHKP50053 298 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RPS18P62269 152 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 POLR2LP62875 67 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 GFPT1Q06210 699 aaPredicted RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE1Q13065 139 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GAGE4Q13068 117 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TNK1Q13470 666 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 HNF4GQ14541 408 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PPA1Q15181 289 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 HLFQ16534 295 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 CALCRLQ16602 461 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 FAM174BQ3ZCQ3 159 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TDRD12Q587J7 1177 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TXNRD3NBQ6F5E7 133 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NADSYN1Q6IA69 706 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 C11orf63Q6NUN7 778 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 DLK2Q6UY11 383 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PLEKHM3Q6ZWE6 761 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NUP54Q7Z3B4 507 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 ARHGAP22Q7Z5H3 698 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PIGWQ7Z7B1 504 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 FJX1Q86VR8 437 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 AMIGO1Q86WK6 493 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 FOXRED2Q8IWF2 684 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 CCDC83Q8IWF9 413 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 GBGT1Q8N5D6 347 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NEK11Q8NG66 645 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 OR5M8Q8NGP6 311 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 SLC26A7Q8TE54 656 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 SSMEM1Q8WWF3 244 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PIGTQ969N2 578 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PHF21AQ96BD5 680 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 EEF2KMTQ96G04 330 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PDLIM5Q96HC4 596 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 C3orf30Q96M34 536 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TMEM237Q96Q45 408 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RUFY1Q96T51 708 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PKP4Q99569 1192 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TM6SF1Q9BZW5 370 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 XPO4Q9C0E2 1151 aaKnown RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 C1orf21Q9H246 121 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 RNPEPL1Q9HAU8 725 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NOX4Q9NPH5 578 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PDRG1Q9NUG6 133 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 ANO10Q9NW15 660 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 HPF1Q9NWY4 346 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 OSER1Q9NX31 292 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NPAP1Q9NZP6 1156 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 NAP1L2Q9ULW6 460 aaPredicted RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 TRIM17Q9Y577 477 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 SPATA31E1Q6ZUB1 1445 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 PIK3C2AO00443 1686 aa4□□□□□ -1.77
SNHG1-217ENST00000541578 TRIP12Q14669 1992 aaPredicted RBP4□□□□□ -1.77
SNHG1-217ENST00000541578 CGNL1Q0VF96 1302 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 A0A1W2PPQ1 181 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 CLEC18AA5D8T8 446 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 MAGEA13PA6NCF6 341 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms