RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ESAMQ96AP7 390 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 ZNF578Q96N58 590 aaPredicted RBP14.89□□□□□ -0.03
DDB1-218ENST00000540784 PRAP1Q96NZ9 151 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 TEFMQ96QE5 360 aaKnown RBP14.89□□□□□ -0.03
DDB1-218ENST00000540784 OR4K3Q96R72 315 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 PLCD4Q9BRC7 762 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 CAPS2Q9BXY5 557 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 CD244Q9BZW8 370 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 MRPL46Q9H2W6 279 aaKnown RBP14.89□□□□□ -0.03
DDB1-218ENST00000540784 CCDC86Q9H6F5 360 aaKnown RBP14.89□□□□□ -0.03
DDB1-218ENST00000540784 APMAPQ9HDC9 416 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 SLC6A20Q9NP91 592 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 THSD1Q9NS62 852 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 TMEM216Q9P0N5 145 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 ANKMY1Q9P2S6 941 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 GRID1Q9ULK0 1009 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 PCDHGA7Q9Y5G6 932 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
DDB1-218ENST00000540784 IGKV1-8A0A0C4DH67 115 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 C9orf172C9J069 976 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 COPEO14579 308 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 SLC5A2P31639 672 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 CRHR1P34998 444 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 ALDH18A1P54886 795 aaKnown RBP14.88□□□□□ -0.03
DDB1-218ENST00000540784 FBXO48Q5FWF7 155 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 ZNF425Q6IV72 752 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 PAQR7Q86WK9 346 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 ZNF501Q96CX3 271 aaPredicted RBP14.88□□□□□ -0.03
DDB1-218ENST00000540784 FCRL4Q96PJ5 515 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 CENPHQ9H3R5 247 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 ASCL3Q9NQ33 180 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 DNAJC11Q9NVH1 559 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 CUEDC1Q9NWM3 386 aaPredicted RBP14.88□□□□□ -0.03
DDB1-218ENST00000540784 XPR1Q9UBH6 696 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 TNPO3Q9Y5L0 923 aaKnown RBP14.88□□□□□ -0.03
DDB1-218ENST00000540784 B3GALT1Q9Y5Z6 326 aa14.88□□□□□ -0.03
DDB1-218ENST00000540784 OR2A25A4D2G3 310 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 CDRT15L2A8MXV6 281 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 TMEM150CB9EJG8 249 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 KLK8O60259 260 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 CCNT2O60583 730 aaKnown RBP14.87□□□□□ -0.03
DDB1-218ENST00000540784 SRPX2O60687 465 aaPredicted RBP14.87□□□□□ -0.03
DDB1-218ENST00000540784 GLRA3O75311 464 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 H2AFYO75367 372 aaKnown RBP14.87□□□□□ -0.03
DDB1-218ENST00000540784 CDH1P12830 882 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 GNAZP19086 355 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 TAC1P20366 129 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 CCR8P51685 355 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 RELAQ04206 551 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 SLC18A2Q05940 514 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 CASP8Q14790 479 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDB1-218ENST00000540784 SRRM1Q8IYB3 904 aaKnown RBP14.87□□□□□ -0.03
DDB1-218ENST00000540784 GPR135Q8IZ08 494 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 C4orf33Q8N1A6 199 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 TMEM151AQ8N4L1 468 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 SNX31Q8N9S9 440 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 ABHD11Q8NFV4 315 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 MDM1Q8TC05 714 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 SLC5A11Q8WWX8 675 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 NEIL2Q969S2 332 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 TMEM79Q9BSE2 394 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 IRAK4Q9NWZ3 460 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 PILRAQ9UKJ1 303 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 SH2B3Q9UQQ2 575 aa14.87□□□□□ -0.03
DDB1-218ENST00000540784 A0A0J9YVX5 310 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 K7EPI3 171 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 CLGNO14967 610 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 HCRTR1O43613 425 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 CTSVO60911 334 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 OR2B3O76000 313 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 GRK3P35626 688 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 GABRA4P48169 554 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 AGTR2P50052 363 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 ITGA1P56199 1179 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 CSNK1G2P78368 415 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 CDC16Q13042 620 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 DEFB110Q30KQ9 67 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 TBC1D25Q3MII6 688 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 PWWP2BQ6NUJ5 590 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 NXPE4Q6UWF7 544 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 UNQ6494/PRO21346Q6UXR6 183 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 LRRC70Q7Z2Q7 622 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 PTGR2Q8N8N7 351 aaPredicted RBP14.86□□□□□ -0.03
DDB1-218ENST00000540784 OR4K1Q8NGD4 311 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 OR1L3Q8NH93 324 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 FGF11Q92914 225 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 PMEPA1Q969W9 287 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 ZBTB9Q96C00 473 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 PHF21BQ96EK2 531 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 SMC6Q96SB8 1091 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 ZFYVE21Q9BQ24 234 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 SELENOSQ9BQE4 189 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 TMEM121BQ9BXQ6 578 aaPredicted RBP14.86□□□□□ -0.03
DDB1-218ENST00000540784 SPRTNQ9H040 489 aaPredicted RBP14.86□□□□□ -0.03
DDB1-218ENST00000540784 GPRC5BQ9NZH0 403 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 FOXJ2Q9P0K8 574 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms