RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 C1orf216Q8TAB5 229 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SELENOMQ8WWX9 145 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 DNASE2BQ8WZ79 361 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 NEIL2Q969S2 332 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 KLHL29Q96CT2 875 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 PPP3R2Q96LZ3 170 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ELOVL6Q9H5J4 265 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ZNF490Q9ULM2 529 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 THADAQ6YHU6 1953 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ABCA7Q8IZY2 2146 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ARHGEF17Q96PE2 2063 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ANKRD65E5RJM6 399 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 EML2O95834 649 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 ALDOCP09972 364 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 PTPN4P29074 926 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 MNAT1P51948 309 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 ERVK-8P63133 956 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 TSTA3Q13630 321 aaPredicted RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 HERC3Q15034 1050 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 PLK5Q496M5 336 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 PLA2G2CQ5R387 149 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 C6orf136Q5SQH8 315 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 ATG9BQ674R7 924 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 SUSD1Q6UWL2 747 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 OR52E1Q8NGJ3 308 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 OR2L8Q8NGY9 312 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC7A6OSQ96CW6 309 aaPredicted RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 LOXL4Q96JB6 756 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 ZC3H10Q96K80 434 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 MARK4Q96L34 752 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 EFCAB11Q9BUY7 163 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 LRMDAQ9H2I8 198 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 ARRDC1-AS1Q9H2J1 176 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 TCEAL2Q9H3H9 227 aaPredicted RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 TM9SF3Q9HD45 589 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 GIMAP2Q9UG22 337 aa13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 TDRD6O60522 2096 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-216ENST00000540755 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 TLR4O00206 839 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PEX11AO75192 247 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PDYNP01213 254 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 C1GALT1C1LP0DN25 315 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 CTSEP14091 401 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 IDO1P14902 403 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PRPH2P23942 346 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 MAOBP27338 520 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 STX1BP61266 288 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 GRIK2Q13002 908 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 LAPTM5Q13571 262 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 NR6A1Q15406 480 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 C10orf62Q5T681 223 aaPredicted RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 NXPE4Q6UWF7 544 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 TMPRSS11BQ86T26 416 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 TMEFF1Q8IYR6 380 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 LMNTD1Q8N9Z9 388 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 RP9Q8TA86 221 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 WDR20Q8TBZ3 569 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 SMOC1Q9H4F8 434 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 FARSBQ9NSD9 589 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ZNF624Q9P2J8 865 aaPredicted RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ICKQ9UPZ9 632 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PCDHGA11Q9Y5H2 935 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 OR5K4A6NMS3 321 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 CSF2P04141 144 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ADRB1P08588 477 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ZNF806P0C7X5 589 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 THRAP10827 490 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 COX4I1P13073 169 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC2A4P14672 509 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 NME1P15531 152 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 VARSP26640 1264 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ACADVLP49748 655 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 EMX2Q04743 252 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 CSTF3Q12996 717 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 MAD2L1Q13257 205 aaPredicted RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 MAPRE2Q15555 327 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 IMPG1Q17R60 797 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PAGE2BQ5JRK9 111 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 CATSPEREQ5SY80 951 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 C11orf74Q86VG3 221 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 LINC01555Q8NAE3 123 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 FNDC5Q8NAU1 212 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ZFPM2Q8WW38 1151 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 REPS1Q96D71 796 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 CXorf40BQ96DE9 158 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms