RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 RP1L1Q8IWN7 2480 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 A0A0J9YVX5 310 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 MAP2K7O14733 419 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 DNAJB5O75953 348 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 SLC16A8O95907 504 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 EIF2S1P05198 315 aaKnown RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 ENO2P09104 434 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FBLP22087 321 aaKnown RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 AVPR1BP47901 424 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 TERF1P54274 439 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 IL2P60568 153 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 GNG11P61952 73 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 CTBP1Q13363 440 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FAM53BQ14153 422 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FRG1Q14331 258 aaKnown RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 HIF1AQ16665 826 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 HSP90AA5PQ58FG0 334 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 PRAMEF13Q5VWM6 474 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 ANKRD22Q5VYY1 191 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 CPZQ66K79 652 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FCRL6Q6DN72 434 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 MAATS1Q7Z4T9 603 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 ADCK2Q7Z695 626 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 CNTN4Q8IWV2 1026 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FAM26EQ8N5C1 309 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 C2CD4AQ8NCU7 369 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 MIB2Q96AX9 1013 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 RNF31Q96EP0 1072 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 SNF8Q96H20 258 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 VPS39Q96JC1 886 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 GPR21Q99679 349 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 AARSD1Q9BTE6 412 aaKnown RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 TRIM55Q9BYV6 548 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 DRC3Q9H069 523 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 ILKAPQ9H0C8 392 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 EPS8L2Q9H6S3 715 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 PARVBQ9HBI1 364 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 FBXO6Q9NRD1 293 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-208ENST00000540683 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 TAC3Q9UHF0 121 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 B3GNT3Q9Y2A9 372 aa9.93□□□□□ -0.82
CDCA3-208ENST00000540683 A6NL46 340 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 E7ENX8 843 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ACPPP15309 386 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 IL10P22301 178 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ITGA3P26006 1051 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 HPDP32754 393 aaPredicted RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 GCGRP47871 477 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 TAP2Q03519 686 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CALCOCO2Q13137 446 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 UBAP2LQ14157 1087 aaKnown RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ELOAQ14241 798 aaKnown RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 SLC9A5Q14940 896 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 NKG7Q16617 165 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 BBS9Q3SYG4 887 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 LCN10Q6JVE6 187 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 FAM45BPQ6NSW5 357 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 JMJD6Q6NYC1 403 aaPredicted RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 RIPOR1Q6ZS17 1223 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 DENND6AQ8IWF6 608 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CSNK1A1LQ8N752 337 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CAMKVQ8NCB2 501 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 FAM45AQ8TCE6 357 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CD200R1Q8TD46 325 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF480Q8WV37 535 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 METTL21AQ8WXB1 218 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CDKL2Q92772 493 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 FAM136AQ96C01 138 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CERS2Q96G23 380 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 PKP4Q99569 1192 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 CRB3Q9BUF7 120 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ACAT2Q9BWD1 397 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 LHPPQ9H008 270 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 AGPAT4Q9NRZ5 378 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 IARS2Q9NSE4 1012 aaKnown RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ZFATQ9P243 1243 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 TXNDC16Q9P2K2 825 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 TEKT2Q9UIF3 430 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 ANKRD12Q6UB98 2062 aa9.92□□□□□ -0.82
CDCA3-208ENST00000540683 SETXQ7Z333 2677 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 SNRNP200O75643 2136 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 PRRC2CQ9Y520 2896 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 IGLV3-12A0A075B6K2 115 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 KCNE1BA0A087WTH5 132 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 A0A1W2PPV9 198 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 URADA6NGE7 173 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 VSTM2BA6NLU5 285 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 H0YGG7 62 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 H0YIG0 161 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 CTSVO60911 334 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 HAUS5O94927 633 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms