RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 EBNA1BP2Q99848 306 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SLC26A1Q9H2B4 701 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZNF304Q9HCX3 659 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ANKMY1Q9P2S6 941 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PCYOX1Q9UHG3 505 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 TRMT6Q9UJA5 497 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 GFYI3L273 518 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SOCS6O14544 535 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CCNDBP1O95273 360 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 UQCRFS1P47985 274 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 TIAL1Q01085 375 aaKnown RBP eCLIP18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 UBAP2LQ14157 1087 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MYBPC3Q14896 1274 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRTGQ2VWP7 1150 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 THEMIS2Q5TEJ8 643 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ADCK2Q7Z695 626 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PCGF5Q86SE9 256 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRSS58Q8IYP2 241 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CSNK1A1LQ8N752 337 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 Q8NA96 180 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SLCO2A1Q92959 643 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PWWP2AQ96N64 755 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZNF552Q9H707 407 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ATP13A2Q9NQ11 1180 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SLAMF7Q9NQ25 335 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SLC17A6Q9P2U8 582 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 NXT1Q9UKK6 140 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 RUVBL1Q9Y265 456 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HS3ST3B1Q9Y662 390 aa18.19■□□□□ 0.5
TNFRSF1A-212ENST00000539372 VSTM2BA6NLU5 285 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 VPS4BO75351 444 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 TTC4O95801 387 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ALPPP05187 535 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ITGA3P26006 1051 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 IVDP26440 423 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 GABRB3P28472 473 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SKIV2L2P42285 1042 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CARSP49589 748 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 GNG11P61952 73 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MUM1Q2TAK8 710 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HKDC1Q2TB90 917 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SPANXN3Q5MJ09 141 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 RBM20Q5T481 1227 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZNF425Q6IV72 752 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRMT9Q6P2P2 845 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 KIRREL2Q6UWL6 708 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HPS6Q86YV9 775 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 LRRC56Q8IYG6 542 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 EEF1AKMT1Q8WVE0 214 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PNPLA2Q96AD5 504 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CFAP36Q96G28 342 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PPANQ9NQ55 473 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CUEDC1Q9NWM3 386 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 C5AR2Q9P296 337 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MAP10Q9P2G4 905 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ADAMTS6Q9UKP5 1117 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 VPS4AQ9UN37 437 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MAP4K5Q9Y4K4 846 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HECTD1Q9ULT8 2610 aa18.18■□□□□ 0.5
TNFRSF1A-212ENST00000539372 FFAR3O14843 346 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HAT1O14929 419 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 GPR42O15529 346 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 FBLP22087 321 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 GNLYP22749 145 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 IMPA1P29218 277 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CDKN2DP55273 166 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 OCA2Q04671 838 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 KLC1Q07866 573 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SRSF1Q07955 248 aaKnown RBP eCLIP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 AIMP2Q13155 320 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 INPP5JQ15735 1006 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 RBBP7Q16576 425 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PAQR3Q6TCH7 311 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CREG2Q8IUH2 290 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PLD3Q8IV08 490 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 STT3BQ8TCJ2 826 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 RERGQ96A58 199 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MIEF2Q96C03 454 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 OR2A5Q96R48 311 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MESP1Q9BRJ9 268 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CRB3Q9BUF7 120 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 YIPF2Q9BWQ6 316 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZBTB20Q9HC78 741 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SEMA3GQ9NS98 782 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 UTP6Q9NYH9 597 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZNF282Q9UDV7 671 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ANKRD12Q6UB98 2062 aa18.17■□□□□ 0.5
TNFRSF1A-212ENST00000539372 H7BY64 318 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 AHSGP02765 367 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 STATHP02808 62 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZGLP1P0C6A0 271 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 EZRP15311 586 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ELK3P41970 407 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ABATP80404 500 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 DR1Q01658 176 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PLEKHN1Q494U1 663 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 VWA2Q5GFL6 755 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRAMEF13Q5VWM6 474 aa18.16■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MBOAT1Q6ZNC8 495 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms