RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-213	ENST00000539357	PLAG1	Q6DJT9	500 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-213	ENST00000539357	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-213	ENST00000539357	SLC25A41	Q8N5S1	370 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	HORMAD2	Q8N7B1	307 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	ZNF398	Q8TD17	642 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	LCOR	Q96JN0	433 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-213	ENST00000539357	CABS1	Q96KC9	395 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	ZFYVE21	Q9BQ24	234 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	SYNPO2L	Q9H987	977 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	PCDH18	Q9HCL0	1135 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	PLSCR2	Q9NRY7	297 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-213	ENST00000539357	ASF1A	Q9Y294	204 aa		11.52	□□□□□ -0.57
POLE-213	ENST00000539357	TENM1	Q9UKZ4	2725 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	NCKAP5	O14513	1909 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	RNF8	O76064	485 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	TP53	P04637	393 aa	Predicted RBP	11.51	□□□□□ -0.57
POLE-213	ENST00000539357	RARA	P10276	462 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	SERPINB6	P35237	376 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	ASCL1	P50553	236 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	AP2B1	P63010	937 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	MAMLD1	Q13495	774 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	DPYSL2	Q16555	572 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	CCDC38	Q502W7	563 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	TCTE1	Q5JU00	501 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	C1orf185	Q5T7R7	199 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.51	□□□□□ -0.57
POLE-213	ENST00000539357	SEM1	Q6ZVN7	128 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	MDGA2	Q7Z553	956 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	MCOLN2	Q8IZK6	566 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	LINC01555	Q8NAE3	123 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	CCNY	Q8ND76	341 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	C16orf52	Q8NHV5	167 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	PIGT	Q969N2	578 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	LINC00615	Q96LM1	132 aa	Predicted RBP	11.51	□□□□□ -0.57
POLE-213	ENST00000539357	ZNF285	Q96NJ3	590 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	SMC6	Q96SB8	1091 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	CYTH2	Q99418	400 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	PIP5K1A	Q99755	562 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	PIGQ	Q9BRB3	760 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	SARG	Q9BW04	601 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	AMBRA1	Q9C0C7	1298 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	VN1R1	Q9GZP7	353 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357	NOTCH1	P46531	2555 aa		11.51	□□□□□ -0.57
POLE-213	ENST00000539357		A0A0A6YYC8	382 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-213	ENST00000539357		G3V3Y1	287 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357		I3L1I5	382 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-213	ENST00000539357	FAM157C	P0CG43	387 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	DES	P17661	470 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	EGR1	P18146	543 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	CCNC	P24863	283 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	CFP	P27918	469 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	PSMB5	P28074	263 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	HMGCL	P35914	325 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	SLC10A2	Q12908	348 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-213	ENST00000539357	MINDY4	Q4G0A6	757 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.5	□□□□□ -0.57
POLE-213	ENST00000539357	CCDC122	Q5T0U0	273 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	NCBP2-AS2	Q69YL0	99 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	PRMT9	Q6P2P2	845 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	TNIP2	Q8NFZ5	429 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	BLOC1S5	Q8TDH9	187 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	METTL21A	Q8WXB1	218 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	EPB41L4B	Q9H329	900 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	ASB8	Q9H765	288 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357	CDC42EP3	Q9UKI2	254 aa		11.5	□□□□□ -0.57
POLE-213	ENST00000539357		A0A0G2JMM0	328 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357		A0A1W2PPB8	328 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357		A0A1W2PRS3	328 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	KRT87P	A6NCN2	255 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	FIGNL2	A6NMB9	653 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	KIR3DP1	A8MWS1	328 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	CES2	O00748	559 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	EPHB6	O15197	1021 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	CELA3A	P09093	270 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	PRSS56	P0CW18	603 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	PRKCSH	P14314	528 aa	Predicted RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	SOX5	P35711	763 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	CYB561	P49447	251 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	PRLHR	P49683	370 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	CSE1L	P55060	971 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	PPIA	P62937	165 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	GBE1	Q04446	702 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	ITGA9	Q13797	1035 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	KIR2DS3	Q14952	304 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	SF1	Q15637	639 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	IFI16	Q16666	785 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	MAN2A1	Q16706	1144 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	HKDC1	Q2TB90	917 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	ZNF658B	Q4V348	819 aa	Predicted RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	ANKRD37	Q7Z713	158 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	RPS19BP1	Q86WX3	136 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	SREK1	Q8WXA9	508 aa	Known RBP	11.49	□□□□□ -0.57
POLE-213	ENST00000539357	ROBO4	Q8WZ75	1007 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	CCDC34	Q96HJ3	373 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	NDST4	Q9H3R1	872 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	DEPP	Q9NTK1	212 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	OR6C2	Q9NZP2	312 aa		11.49	□□□□□ -0.57
POLE-213	ENST00000539357	ACAD8	Q9UKU7	415 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms