RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SMARCAD1Q9H4L7 1026 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 DPP3Q9NY33 737 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 CCDC189A1A4V9 331 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 OR2A25A4D2G3 310 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 O00370 1275 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 ARPC2O15144 300 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 ERAL1O75616 437 aaKnown RBP3.76□□□□□ -1.81
CCDC7-209ENST00000539197 DNASE1P24855 282 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 MPZP25189 248 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 SLC15A1P46059 708 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 KHKP50053 298 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 DNA2P51530 1060 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 KLC1Q07866 573 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 SGCGQ13326 291 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 EIF4EBP2Q13542 120 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-209ENST00000539197 PHKG1Q16816 387 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 RNLSQ5VYX0 342 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 TMEM64Q6YI46 380 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 C3P1Q6ZMU1 363 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 RNF130Q86XS8 419 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 ZNF595Q8IYB9 648 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 LGI2Q8N0V4 545 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 OR7A2PQ8NGA2 310 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 OR10G7Q8NGN6 311 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 MS4A10Q96PG2 267 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 MMP27Q9H306 513 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 JPT2Q9H910 190 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 STK26Q9P289 416 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 SELENOKQ9Y6D0 94 aa3.76□□□□□ -1.81
CCDC7-209ENST00000539197 PRB2P02812 416 aaPredicted RBP3.75□□□□□ -1.81
CCDC7-209ENST00000539197 GP1BBP13224 206 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 SELEP16581 610 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 OR3A2P47893 321 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 IGSF11Q5DX21 431 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 TMEM211Q6ICI0 200 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 B3GALT6Q96L58 329 aa3.75□□□□□ -1.81
CCDC7-209ENST00000539197 EIF2B3Q9NR50 452 aaKnown RBP3.75□□□□□ -1.81
CCDC7-209ENST00000539197 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.75□□□□□ -1.81
CCDC7-209ENST00000539197 TRBV4-1A0A0J9YWV2 114 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 PI4KAP2A4QPH2 592 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 PGPEP1LA6NFU8 196 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 PTGES3LE9PB15 166 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 OGTO15294 1046 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 FDPSP14324 419 aaKnown RBP3.74□□□□□ -1.81
CCDC7-209ENST00000539197 ELAVL4P26378 380 aaKnown RBP3.74□□□□□ -1.81
CCDC7-209ENST00000539197 CD27P26842 260 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 ATP4BP51164 291 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 CDH13P55290 713 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 HNRNPKP61978 463 aaKnown RBP eCLIP3.74□□□□□ -1.81
CCDC7-209ENST00000539197 GPR33Q49SQ1 333 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 NUP54Q7Z3B4 507 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 C11orf42Q8N5U0 333 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 NSMAFQ92636 917 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 SYN2Q92777 582 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-209ENST00000539197 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 UBAC1Q9BSL1 405 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 PSD3Q9NYI0 1048 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 BAIAP2L1Q9UHR4 511 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 FBXO2Q9UK22 296 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-209ENST00000539197 PADI2Q9Y2J8 665 aa3.74□□□□□ -1.81
CCDC7-209ENST00000539197 ARID2Q68CP9 1835 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 TRBV5-5A0A0J9YX44 114 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 GLTPD2A6NH11 291 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 J3KRW8 73 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 CTDSP2O14595 271 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 ADAMDEC1O15204 470 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 TLX2O43763 284 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-209ENST00000539197 NXPH4O95158 308 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 TRIM21P19474 475 aaKnown RBP3.73□□□□□ -1.81
CCDC7-209ENST00000539197 AOC1P19801 751 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 TRA2AQ13595 282 aaKnown RBP eCLIP3.73□□□□□ -1.81
CCDC7-209ENST00000539197 ZNF146Q15072 292 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 KBTBD6Q86V97 674 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 FAM89BQ8N5H3 189 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 OR10Q1Q8NGQ4 319 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 SFXN2Q96NB2 322 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 CCDC28BQ9BUN5 200 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 OSGEPL1Q9H4B0 414 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
CCDC7-209ENST00000539197 A0A087X0M5 115 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 A0A1B0GX30 115 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 B4DLN1 442 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 TRAFD1O14545 582 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-209ENST00000539197 HAT1O14929 419 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 PTP4A3O75365 173 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 ALDH3A2P51648 485 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 MRPL12P52815 198 aaKnown RBP3.72□□□□□ -1.81
CCDC7-209ENST00000539197 FKBP3Q00688 224 aaKnown RBP3.72□□□□□ -1.81
CCDC7-209ENST00000539197 TRIM29Q14134 588 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 KRT79Q5XKE5 535 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 CCBE1Q6UXH8 406 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-209ENST00000539197 FCRLAQ7L513 359 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 ZC3H3Q8IXZ2 948 aaKnown RBP3.72□□□□□ -1.81
CCDC7-209ENST00000539197 SLAMF9Q96A28 289 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 EQTNQ9NQ60 294 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 PLCL2Q9UPR0 1127 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 CHKBQ9Y259 395 aa3.72□□□□□ -1.81
CCDC7-209ENST00000539197 WBP11Q9Y2W2 641 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms