RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SLC2A11Q9BYW1 496 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 VN1R1Q9GZP7 353 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 POLR1EQ9GZS1 481 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SEMA6AQ9H2E6 1030 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ABCB8Q9NUT2 735 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM51Q9NW97 253 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM45AQ9NWC5 275 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OCIAD1Q9NX40 245 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CDC14AQ9UNH5 594 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RPH3AQ9Y2J0 694 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 POMT1Q9Y6A1 747 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IKBKGQ9Y6K9 419 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 KIF21AQ7Z4S6 1674 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 AKNAQ7Z591 1439 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GRIN2DO15399 1336 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 A0A0U1RQK1 487 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZCWPW2A0A1B0GU75 182 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF320A2RRD8 509 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OR6C75A6NL08 312 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 H0YGN5 161 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RTCAO00442 366 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PGRMC2O15173 223 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RGS14O43566 566 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZIC3O60481 467 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DFFBO76075 338 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 KDM4BO94953 1096 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SFTPBP07988 381 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SMIM18P0DKX4 95 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PRF1P14222 555 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANPEPP15144 967 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF12P17014 697 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ACHEP22303 614 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PSMB4P28070 264 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RPL34P49207 117 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ERVK-16P61578 105 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ACSM1Q08AH1 577 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF268Q14587 947 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 C12orf60Q5U649 245 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 C18orf63Q68DL7 685 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HIST2H2AA3Q6FI13 130 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP0.98□□□□□ -2.254e-15■■■■□ 26
HIF1A-204ENST00000539097 IL17RELQ6ZVW7 336 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD46Q86W74 232 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DZIP1Q86YF9 867 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CNGA4Q8IV77 575 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF619Q8N2I2 560 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 UXS1Q8NBZ7 420 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CNNM3Q8NE01 707 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLC24A4Q8NFF2 622 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 KIF18AQ8NI77 898 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 KCNE4Q8WWG9 221 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 FIG4Q92562 907 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 APBB2Q92870 758 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RPL36ALQ969Q0 106 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TEKT1Q969V4 418 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MIB2Q96AX9 1013 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ORAI1Q96D31 301 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ERLEC1Q96DZ1 483 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SIPA1Q96FS4 1042 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ADGRG7Q96K78 797 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC114Q96M63 670 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 AGAP3Q96P47 875 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GFM1Q96RP9 751 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 EGLN1Q9GZT9 426 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TRPV6Q9H1D0 765 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 P2RY12Q9H244 342 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GANQ9H2C0 597 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ARRDC1-AS1Q9H2J1 176 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DBNDD1Q9H9R9 158 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LMAN1LQ9HAT1 526 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HHATLQ9HCP6 504 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IARS2Q9NSE4 1012 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 STARD5Q9NSY2 213 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ARHGEF38Q9NXL2 777 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TAB2Q9NYJ8 693 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SEPT10Q9P0V9 454 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OR14J1Q9UGF5 321 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HACL1Q9UJ83 578 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RCOR1Q9UKL0 485 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PLEKHA6Q9Y2H5 1048 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RNF103-CHMP3A0A140T963 221 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 C2orf92A0A1B0GVN3 265 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 FAM172BPA6NC97 362 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF587BE7ETH6 402 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IKBKBO14920 756 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 XRCC3O43542 346 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GPRIN2O60269 458 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SELENOFO60613 162 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PRAF2O60831 178 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 NOL3O60936 208 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SPAG6O75602 509 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SORBS2O94875 1100 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 NDUFA7O95182 113 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CXCL14O95715 111 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PTBP3O95758 552 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 H1F0P07305 194 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD34CP0C6C1 535 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TYMPP19971 482 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CCNE1P24864 410 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HMGB2P26583 209 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms