RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 MOXD2PA6NHM9 499 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 DPM1O60762 260 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 HSMCR30P0CW71 290 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 IFNA8P32881 189 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 PXNP49023 591 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 TWF2Q6IBS0 349 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 KIAA1841Q6NSI8 718 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 PSAPL1Q6NUJ1 521 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 DOK6Q6PKX4 331 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 C19orf48Q6RUI8 117 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SBSNQ6UWP8 590 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 Q6ZPB1 254 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 ZNF367Q7RTV3 350 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 GLT6D1Q7Z4J2 308 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SPERTQ8NA61 448 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 HSH2DQ96JZ2 352 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 KCNC2Q96PR1 638 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SMURF1Q9HCE7 757 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 RANGRFQ9HD47 186 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 TMLHEQ9NVH6 421 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 ZSCAN5BA6NJL1 495 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 RAMP2O60895 175 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 WDR47O94967 919 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 CLCN4P51793 760 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SLC14A1Q13336 389 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SERINC3Q13530 473 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 IRF3Q14653 427 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 ANKRD46Q86W74 232 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 RGL4Q8IZJ4 473 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 SIX5Q8N196 739 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 DNAJB3Q8WWF6 145 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 EPYCQ99645 322 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 TLR6Q9Y2C9 796 aa18.05■□□□□ 0.48
SFSWAP-207ENST00000538548 FFAR2O15552 330 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 MYCP01106 439 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 KDELR2P33947 212 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 CDKN2CP42773 168 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 TEKQ02763 1124 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 TAF1AQ15573 450 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 VMACQ2NL98 169 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 MS4A13Q5J8X5 152 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 GNASQ5JWF2 1037 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 LYPD8Q6UX82 237 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 FYTTD1Q96QD9 318 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 MCCC1Q96RQ3 725 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 NMUR1Q9HB89 426 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 ZNF490Q9ULM2 529 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 MBLAC1A4D2B0 266 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 PKLRP30613 574 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 HTR2BP41595 481 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 HSPA7P48741 367 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 NUDT6P53370 316 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 CRISP3P54108 245 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 CLDN8P56748 225 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 RPS14P62263 151 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 CYP4F2P78329 520 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 BNC1Q01954 994 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 ST3GAL4Q11206 333 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 NFE2Q16621 373 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 CBLL1Q75N03 491 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 EIF3MQ7L2H7 374 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 SLC39A13Q96H72 371 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 NSUN3Q9H649 340 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 MUTYHQ9UIF7 546 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 V9GYH0 126 aa18.04■□□□□ 0.48
SFSWAP-207ENST00000538548 C2orf81A6NN90 581 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 TFECO14948 347 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 SMIM10L2AP0DMW4 78 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 SMIM10L2BP0DMW5 78 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 PSMA3P25788 255 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 CSTF3Q12996 717 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 TIGD5Q53EQ6 642 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 ZNF605Q86T29 641 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 RNF130Q86XS8 419 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 CCDC28AQ8IWP9 274 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 CACTIN-AS1Q8N1I8 211 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 C9orf43Q8TAL5 461 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 RMDN1Q96DB5 314 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 DHRS9Q9BPW9 319 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 RAD18Q9NS91 495 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 KLHL20Q9Y2M5 609 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 IGLV3-10A0A075B6K4 115 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 A0A0G2JMP0 313 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 SLC12A8A0AV02 714 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 MEIS3P2A8K0S8 358 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 CYP7B1O75881 506 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 ESR1P03372 595 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 CLCN7P51798 805 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 FCHO2Q0JRZ9 810 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 SGO1Q5FBB7 561 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 GALNT10Q86SR1 603 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 MDGA1Q8NFP4 955 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 MIOSQ9NXC5 875 aa18.03■□□□□ 0.48
SFSWAP-207ENST00000538548 A0A1W2PQH9 124 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 RFXANKO14593 260 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 GPR182O15218 404 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 RGS5O15539 181 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 PRAMEF11O60813 436 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms