RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MIEF2Q96C03 454 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 C19orf60Q96EN9 201 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 CABS1Q96KC9 395 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 C10orf90Q96M02 699 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 C5orf34Q96MH7 638 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 TRIM56Q9BRZ2 755 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 DPH7Q9BTV6 452 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 CCDC68Q9H2F9 335 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 XAB2Q9HCS7 855 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 MRPS30Q9NP92 439 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 C3orf18Q9UK00 162 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 COMMD10Q9Y6G5 202 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ITPR2Q14571 2701 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 SCN2AQ99250 2005 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 TCRBV7S3A2A0A539 114 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 MAGEB16A2A368 324 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 KRT87PA6NCN2 255 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 EIF3FO00303 357 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 E2F3O00716 465 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CEP104O60308 925 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ALOX12BO75342 701 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CYC1P08574 325 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ANXA5P08758 320 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZGLP1P0C6A0 271 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 MPC1LP0DKB6 136 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 FMO4P31512 558 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 OR1D4P47884 311 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 GLRBP48167 497 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 PNLIPRP1P54315 467 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 PRDX1Q06830 199 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 GPS1Q13098 491 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 MFAP5Q13361 173 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 THOC5Q13769 683 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 DHX34Q14147 1143 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 FASTKQ14296 549 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZNF169Q14929 603 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 TLR1Q15399 786 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 HIF1AQ16665 826 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 KLHL38Q2WGJ6 581 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ICE2Q659A1 982 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZNF470Q6ECI4 717 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZNF425Q6IV72 752 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 NEPROQ6NW34 567 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 RPUSD3Q6P087 351 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 CASC4Q6P4E1 433 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CES3Q6UWW8 571 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 PAQR7Q86WK9 346 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 TMEM151BQ8IW70 566 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 KBTBD2Q8IY47 623 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 METTL27Q8N6F8 245 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 CSNK1A1LQ8N752 337 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 PRELID2Q8N945 189 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 MCUQ8NE86 351 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CALML6Q8TD86 181 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 RERGQ96A58 199 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZNF669Q96BR6 464 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 THOC3Q96J01 351 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 LMF1Q96S06 567 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 EBNA1BP2Q99848 306 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 ACAT2Q9BWD1 397 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZBTB20Q9HC78 741 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 MKKSQ9NPJ1 570 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 RIC8BQ9NVN3 520 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 ZC3H7BQ9UGR2 993 aaKnown RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 ERRFI1Q9UJM3 462 aaPredicted RBP8.24□□□□□ -1.09
DDB1-212ENST00000538470 NTNG1Q9Y2I2 539 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CRYL1Q9Y2S2 319 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 MAU2Q9Y6X3 613 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 CACNA1DQ01668 2161 aa8.24□□□□□ -1.09
DDB1-212ENST00000538470 LOC105369274A0A096LPK9 316 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 NSG1A0A0A6YYJ2 146 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 LOC102723532A0A0G2JNH3 316 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 CTAGE9A4FU28 777 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 GOLGA8KD6RF30 607 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 H0YGG7 62 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 GOLGA8TH3BQL2 631 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 MASP2O00187 686 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 NRP2O60462 931 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 MED26O95402 600 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 EIF2S1P05198 315 aaKnown RBP8.23□□□□□ -1.09
DDB1-212ENST00000538470 SERPINA7P05543 415 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 COX6A1P12074 109 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 EDN3P14138 238 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 HRH2P25021 359 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 CXCR2P25025 360 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 SOX11P35716 441 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 MAGEA3P43357 314 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 KCNJ1P48048 391 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 CLCN7P51798 805 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 PER3P56645 1201 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 ARF3P61204 181 aaPredicted RBP8.23□□□□□ -1.09
DDB1-212ENST00000538470 Q0VFX4 171 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 CDC16Q13042 620 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 NDUFA9Q16795 377 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 ATG9BQ674R7 924 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 LRRC8EQ6NSJ5 796 aa8.23□□□□□ -1.09
DDB1-212ENST00000538470 FAM180AQ6UWF9 173 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms