RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TRBV5-5A0A0J9YX44 114 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 GLTPD2A6NH11 291 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 J3KRW8 73 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 CTDSP2O14595 271 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 ARPC2O15144 300 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 ADAMDEC1O15204 470 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 TLX2O43763 284 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-208ENST00000537047 NXPH4O95158 308 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 GJA1P17302 382 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 TRIM21P19474 475 aaKnown RBP3.73□□□□□ -1.81
CCDC7-208ENST00000537047 LMAN1P49257 510 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 TRA2AQ13595 282 aaKnown RBP eCLIP3.73□□□□□ -1.81
CCDC7-208ENST00000537047 PRR30Q53SZ7 412 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-208ENST00000537047 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 KBTBD6Q86V97 674 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 OR10Q1Q8NGQ4 319 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 CCDC28BQ9BUN5 200 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
CCDC7-208ENST00000537047 A0A087X0M5 115 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 A0A1B0GX30 115 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 B4DLN1 442 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 PTP4A3O75365 173 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 PTGER4P35408 488 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 MRPL12P52815 198 aaKnown RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 CAPRIN1Q14444 709 aaKnown RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 ZNF146Q15072 292 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 FAM198BQ6UWH4 519 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 ZC3H3Q8IXZ2 948 aaKnown RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 EXD1Q8NHP7 514 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 MMP27Q9H306 513 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 MTHFD2LQ9H903 347 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 EQTNQ9NQ60 294 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 LNPEPQ9UIQ6 1025 aa3.72□□□□□ -1.81
CCDC7-208ENST00000537047 PA2G4Q9UQ80 394 aaKnown RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 WBP11Q9Y2W2 641 aaKnown RBP3.72□□□□□ -1.81
CCDC7-208ENST00000537047 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 EPB41L2O43491 1005 aaKnown RBP3.71□□□□□ -1.82
CCDC7-208ENST00000537047 SLCO2B1O94956 709 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 IGHV2-70P01814 119 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 ATP1B1P05026 303 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 ZNF19P17023 458 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 AOC1P19801 751 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 DRD3P35462 400 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 MYL7Q01449 175 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 AIMP2Q13155 320 aaKnown RBP3.71□□□□□ -1.82
CCDC7-208ENST00000537047 FAAH2Q6GMR7 532 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 OR5T2Q8NGG2 359 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 SSC4DQ8WTU2 575 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-208ENST00000537047 CALML4Q96GE6 196 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 SFXN2Q96NB2 322 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 ATF6BQ99941 703 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 UBAC1Q9BSL1 405 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 DPP3Q9NY33 737 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 SUCLA2Q9P2R7 463 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-208ENST00000537047 PLCL2Q9UPR0 1127 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 WDR83OSQ9Y284 106 aa3.71□□□□□ -1.82
CCDC7-208ENST00000537047 PTRH2Q9Y3E5 179 aaKnown RBP3.71□□□□□ -1.82
CCDC7-208ENST00000537047 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 CCL24O00175 119 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 ECE2O60344 883 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 PRDM1O75626 825 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 MBD4O95243 580 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 KRT6AP02538 564 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 KRT6BP04259 564 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 GP1BBP13224 206 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 KRT6CP48668 564 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 HLCSP50747 726 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 MAPK12P53778 367 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 LYZP61626 148 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 RFTN1Q14699 578 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-208ENST00000537047 PARP8Q8N3A8 854 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 NAP1L4Q99733 375 aaKnown RBP3.7□□□□□ -1.82
CCDC7-208ENST00000537047 JPT2Q9H910 190 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 MYNNQ9NPC7 610 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 SLC35C2Q9NQQ7 365 aa3.7□□□□□ -1.82
CCDC7-208ENST00000537047 LOC102723996A0A087X1L8 192 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 SRRM4A7MD48 611 aaKnown RBP3.69□□□□□ -1.82
CCDC7-208ENST00000537047 VILLO15195 856 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 DANCRP0C864 163 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 ELAVL4P26378 380 aaKnown RBP3.69□□□□□ -1.82
CCDC7-208ENST00000537047 PHKG1Q16816 387 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 MCMDC2Q4G0Z9 681 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 KRT79Q5XKE5 535 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 C3P1Q6ZMU1 363 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 RAPH1Q70E73 1250 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 C1orf131Q8NDD1 294 aaKnown RBP3.69□□□□□ -1.82
CCDC7-208ENST00000537047 OR4K1Q8NGD4 311 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 OR52B6Q8NGF0 335 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 NSMAFQ92636 917 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 ABT1Q9ULW3 272 aaKnown RBP3.69□□□□□ -1.82
CCDC7-208ENST00000537047 CHKBQ9Y259 395 aa3.69□□□□□ -1.82
CCDC7-208ENST00000537047 ZNF644Q9H582 1327 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-208ENST00000537047 A0A1W2PQ09 198 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 NEMP2A6NFY4 417 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 THY1P04216 161 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 ALDH1B1P30837 517 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 PRELPP51888 382 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 DCAF7P61962 342 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms