RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CPNE9Q8IYJ1 553 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FBXO15Q8NCQ5 510 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 C9orf43Q8TAL5 461 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PROKR1Q8TCW9 393 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ASB11Q8WXH4 323 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 THAP4Q8WY91 577 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PKP4Q99569 1192 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NDNQ99608 321 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TRIM55Q9BYV6 548 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SRPK3Q9UPE1 567 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 IKBKGQ9Y6K9 419 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC28A2O43868 658 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ARHGAP19Q14CB8 494 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 RBM20Q5T481 1227 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CCDC77Q9BR77 488 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZNF71Q9NQZ8 489 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ENAMQ9NRM1 1142 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TENM4Q6N022 2769 aa17.12■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CCDC151A5D8V7 595 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 C9J4A7 227 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SUV39H1O43463 412 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 VPS26AO75436 327 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 KLF7O75840 302 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 DNAJB5O75953 348 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC16A8O95907 504 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SPRP35270 261 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 UAP1Q16222 522 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZC3H12BQ5HYM0 836 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 GRTP1Q5TC63 336 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PTRH1Q86Y79 214 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZNF480Q8WV37 535 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MRRFQ96E11 262 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 VPS39Q96JC1 886 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 RBBP8Q99708 897 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NDC1Q9BTX1 674 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ACAT2Q9BWD1 397 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 EPB41L4BQ9H329 900 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC6A20Q9NP91 592 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 POC1B-GALNT4F8VUJ3 575 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 K7EM74 188 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 EIF3FO00303 357 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 RFPL1O75677 317 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 INHBAP08476 426 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 HSD17B3P37058 310 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PNLIPRP1P54315 467 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 DCDP81605 110 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MLIPQ5VWP3 458 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CPZQ66K79 652 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FAM45BPQ6NSW5 357 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 UGT3A1Q6NUS8 523 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PPFIBP2Q8ND30 876 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FAM45AQ8TCE6 357 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SMPDL3AQ92484 453 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 DLG3Q92796 817 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SELENOSQ9BQE4 189 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TAS2R13Q9NYV9 303 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TRMT6Q9UJA5 497 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TP53TG5Q9Y2B4 290 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 VWA7Q9Y334 891 aa17.11■□□□□ 0.33
TNFRSF1A-209ENST00000536717 IGKV1-8A0A0C4DH67 115 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FAM95CA0A1B0GW59 222 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 OR2A25A4D2G3 310 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 E7ENX8 843 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 J3QKU1 62 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZBTB14O43829 449 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CNOT3O75175 753 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NR1D1P20393 614 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ITGAXP20702 1163 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CMPK1P30085 196 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MSH2P43246 934 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CDKN2DP55273 166 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TAP2Q03519 686 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CHAF1BQ13112 559 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC9A5Q14940 896 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TCTE1Q5JU00 501 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 HECTD2Q5U5R9 776 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MRPL14Q6P1L8 145 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TTLL10Q6ZVT0 673 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 RNF44Q7L0R7 432 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 LRRC56Q8IYG6 542 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MREGQ8N565 214 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC44A1Q8WWI5 657 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PAFAH2Q99487 392 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 C17orf62Q9BQA9 187 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MCMBPQ9BTE3 642 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms