RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ZNF839A8K0R7 811 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 H0YGG7 62 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 H7BY64 318 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 CDC7O00311 574 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 HAT1O14929 419 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 WISP3O95389 354 aaPredicted RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 STATHP02808 62 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 HBQ1P09105 142 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 ALAS2P22557 587 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 CCR10P46092 362 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 ARF3P61204 181 aaPredicted RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SNRPNP63162 240 aaKnown RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 DCDP81605 110 aaKnown RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 NAE1Q13564 534 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 UGT8Q16880 541 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 KBTBD12Q3ZCT8 623 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 NKAIN1Q4KMZ8 207 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 THEMIS2Q5TEJ8 643 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SBSNQ6UWP8 590 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SYVN1Q86TM6 617 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SPATA6LQ8N4H0 392 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 PROKR1Q8TCW9 393 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 FBF1Q8TES7 1133 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 ALKBH8Q96BT7 664 aaKnown RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 C10orf90Q96M02 699 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 ZFYVE21Q9BQ24 234 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 CCDC177Q9NQR7 707 aaPredicted RBP12.59□□□□□ -0.39
PRKDC-206ENST00000536429 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 TXLNGQ9NUQ3 528 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 NSMCE4AQ9NXX6 385 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 SRPK3Q9UPE1 567 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 KCNMB2Q9Y691 235 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 CTAGE15A4D2H0 777 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 P2RX6O15547 441 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 KLF7O75840 302 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 DNAJB5O75953 348 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 GUCA1CO95843 209 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 RECKO95980 971 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CTAGE8P0CG41 777 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 AGXTP21549 392 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 ECHS1P30084 290 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 ABATP80404 500 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CHAF1BQ13112 559 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 HKDC1Q2TB90 917 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PRAMEF13Q5VWM6 474 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CPZQ66K79 652 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CYS1Q717R9 158 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 COX15Q7KZN9 410 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 ADCK2Q7Z695 626 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CTAGE6Q86UF2 777 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CTAGE4Q8IX94 777 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CTAGE3PQ8IX95 158 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PPM1NQ8N819 430 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 ADAMTS17Q8TE56 1095 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 APOBEC4Q8WW27 367 aaKnown RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PYCR2Q96C36 320 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 PDLIM5Q96HC4 596 aaKnown RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 OR2A5Q96R48 311 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 RBBP8Q99708 897 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 CPNE1Q99829 537 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 SGPP1Q9BX95 441 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 GEMIN8Q9NWZ8 242 aaKnown RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 ARL15Q9NXU5 204 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 UTP6Q9NYH9 597 aaKnown RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-206ENST00000536429 NDOR1Q9UHB4 597 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 POLHQ9Y253 713 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 COL6A6A6NMZ7 2263 aa12.58□□□□□ -0.4
PRKDC-206ENST00000536429 A0A1B0GX78 115 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 C9J4A7 227 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 DSCR3O14972 297 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 SRPX2O60687 465 aaPredicted RBP12.57□□□□□ -0.4
PRKDC-206ENST00000536429 CCNDBP1O95273 360 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 GSTA2P09210 222 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 GP5P40197 560 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 OR1D4P47884 311 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 NFATC3Q12968 1075 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 KCNAB2Q13303 367 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 GRM7Q14831 915 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
PRKDC-206ENST00000536429 TCTE1Q5JU00 501 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 MRPL14Q6P1L8 145 aaKnown RBP12.57□□□□□ -0.4
PRKDC-206ENST00000536429 CSNK1A1LQ8N752 337 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 TTC29Q8NA56 475 aaPredicted RBP12.57□□□□□ -0.4
PRKDC-206ENST00000536429 LRRN4CLQ8ND94 238 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 OR56A3Q8NH54 315 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 CDKL2Q92772 493 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms