RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 B3GNT3Q9Y2A9 372 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 TPRKBQ9Y3C4 175 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 TEX28O15482 410 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 INMTO95050 263 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 EPN2O95208 641 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 UGT2B4P06133 528 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 DAPP51397 102 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 WNT3P56703 355 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 C21orf58P58505 322 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 IRF8Q02556 426 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GSTM4Q03013 218 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GTF2H3Q13889 308 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CAPN13Q6MZZ7 669 aaPredicted RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 LINC00299Q6ZSB3 139 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF621Q6ZSS3 439 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CMTM8Q8IZV2 173 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC15A4Q8N697 577 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 OR7A2PQ8NGA2 310 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 FBXL8Q96CD0 374 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CFHR5Q9BXR6 569 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CCDC90BQ9GZT6 254 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 ATG10Q9H0Y0 220 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 IRAK4Q9NWZ3 460 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 FAM120CQ9NX05 1096 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 SPG21Q9NZD8 308 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 LMCD1Q9NZU5 365 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 TRAV19A0A0A6YYK7 116 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 MAGEB17A8MXT2 336 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CFAP99D6REC4 459 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GRM6O15303 877 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 MITFO75030 526 aaPredicted RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 SEMG1P04279 462 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 FABP3P05413 133 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 FPR1P21462 350 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GP2P55259 537 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 VEZF1Q14119 521 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CTF1Q16619 201 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 UGT8Q16880 541 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GALNT18Q6P9A2 607 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 DCDC5Q6ZRR9 648 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CEP68Q76N32 757 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 GALNT5Q7Z7M9 940 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 TSPYL5Q86VY4 417 aaPredicted RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 RASGRP3Q8IV61 690 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 ZZZ3Q8IYH5 903 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 CNIH3Q8TBE1 160 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 STARD8Q92502 1023 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 SCN3BQ9NY72 215 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 FBXO10Q9UK96 956 aa15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 RUVBL1Q9Y265 456 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-202ENST00000535997 XPNPEP2O43895 674 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 JRKO75564 520 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SLCO2B1O94956 709 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 AP2A2O94973 939 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 TFPTP0C1Z6 253 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 ACVR2AP27037 513 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SIM2Q14190 667 aaPredicted RBP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SPCS2Q15005 226 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 CBLL1Q75N03 491 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 EIF3MQ7L2H7 374 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 PIWIL3Q7Z3Z3 882 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 ABHD11Q8NFV4 315 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 WDR20Q8TBZ3 569 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 FAR1Q8WVX9 515 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF347Q96SE7 839 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 BARD1Q99728 777 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 APOL4Q9BPW4 351 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 ASPSCR1Q9BZE9 553 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 EXD2Q9NVH0 621 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SPATA6Q9NWH7 488 aaPredicted RBP15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC25A13Q9UJS0 675 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 ERVK-11Q9UQG0 969 aa15.53■□□□□ 0.08
CHMP1A-202ENST00000535997 SOBPA7XYQ1 873 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 MYO1GB0I1T2 1018 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 LEFTY2O00292 366 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 DPM1O60762 260 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 COX7A2P14406 83 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF30P17039 623 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC35A2P78381 396 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 AQP6Q13520 282 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 SERPINA13PQ6UXR4 307 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 PTOV1Q86YD1 416 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 CHPT1Q8WUD6 406 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 ELMO1Q92556 727 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 RORBQ92753 470 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF689Q96CS4 500 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 C11orf24Q96F05 449 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 EBPLQ9BY08 206 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 FAM83DQ9H4H8 585 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 RIBC2Q9H4K1 309 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 CD84Q9UIB8 345 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 SLCO3A1Q9UIG8 710 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 TDRKHQ9Y2W6 561 aaKnown RBP15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 DENND4CQ5VZ89 1909 aa15.52■□□□□ 0.08
CHMP1A-202ENST00000535997 CLK3P49761 638 aaKnown RBP15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 NPTX1Q15818 432 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 XKR6Q5GH73 641 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms