RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CCNDBP1O95273 360 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 TIAF1O95411 115 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 S100BP04271 92 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-202ENST00000535042 C1QTNF9P0C862 333 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 FGF5P12034 268 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CDH1P12830 882 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CREB1P16220 341 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 KRT4P19013 534 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 RBMS1P29558 406 aaKnown RBP12.6□□□□□ -0.39
TMEM258-202ENST00000535042 SLC5A2P31639 672 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CSNK1G2P78368 415 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 ACY1Q03154 408 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CASP8Q14790 479 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 PFKFB4Q16877 469 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CATSPEREQ5SY80 951 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 PRAMEF17Q5VTA0 474 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 LCA5Q86VQ0 697 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 C17orf64Q86WR6 236 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 PLD3Q8IV08 490 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 PLCD4Q9BRC7 762 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 HAUS8Q9BT25 410 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 DDA1Q9BW61 102 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 CD244Q9BZW8 370 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 MRPL46Q9H2W6 279 aaKnown RBP12.6□□□□□ -0.39
TMEM258-202ENST00000535042 DCDC2Q9UHG0 476 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 ADAMTS20P59510 1910 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 A0A0J9YVX5 310 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 H3BMH7 237 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 PRAMEF4O60810 478 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 GLRA3O75311 464 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 STK16O75716 305 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SIX3O95343 332 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 GSTA1P08263 222 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 MSL3P1P0C860 447 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 GFAPP14136 432 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 ZNF28P17035 718 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 EPORP19235 508 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 CRHR1P34998 444 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 ALDH18A1P54886 795 aaKnown RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 RAB15P59190 212 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 COL9A2Q14055 689 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 IL11RAQ14626 422 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 TNFAIP8L3Q5GJ75 292 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 DCAF12Q5T6F0 453 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 PRAMEF9Q5VWM5 478 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 FRMPD2BQ6IN97 320 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 RNF44Q7L0R7 432 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 MCATQ8IVS2 390 aaKnown RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SRRM1Q8IYB3 904 aaKnown RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 PTGR2Q8N8N7 351 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 BANPQ8N9N5 519 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SPRY4Q9C004 299 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SPRTNQ9H040 489 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SPNS1Q9H2V7 528 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 TMEM184CQ9NVA4 438 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 DNAJC11Q9NVH1 559 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 ANKMY1Q9P2S6 941 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 RARRES3Q9UL19 164 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 PLCL2Q9UPR0 1127 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 PCDHGA7Q9Y5G6 932 aa12.59□□□□□ -0.39
TMEM258-202ENST00000535042 LOC105369274A0A096LPK9 316 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 LOC102723532A0A0G2JNH3 316 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 A8MT66 165 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 COPEO14579 308 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 HAT1O14929 419 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 RGS16O15492 202 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 MAP3K7O43318 606 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 TLX3O43711 291 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 DLX3O60479 287 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 CCNT2O60583 730 aaKnown RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 IPO13O94829 963 aaKnown RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 PROCP04070 461 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 MEF2AQ02078 507 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 CEACAM20Q6UY09 585 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 ADCK2Q7Z695 626 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 ZFAND4Q86XD8 727 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 PPP1R3BQ86XI6 285 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 OR4N4Q8N0Y3 316 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 OR4K1Q8NGD4 311 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 PHF21BQ96EK2 531 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 OR2A5Q96R48 311 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 B3GNT4Q9C0J1 378 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 CNOT10Q9H9A5 744 aaKnown RBP12.58□□□□□ -0.4
TMEM258-202ENST00000535042 DYRK1BQ9Y463 629 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 KCNE2Q9Y6J6 123 aa12.58□□□□□ -0.4
TMEM258-202ENST00000535042 FEZF1A0PJY2 475 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms