RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CEP85LQ5SZL2 805 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TEX35Q5T0J7 233 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 STXBP5Q5T5C0 1151 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 ACSM2BQ68CK6 577 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TMEM154Q6P9G4 183 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TMEM179Q6ZVK1 233 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 SDCCAG8Q86SQ7 713 aaPredicted RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 MAP7D3Q8IWC1 876 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 EFCAB13Q8IY85 973 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 C10orf67Q8IYJ2 551 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TAGAPQ8N103 731 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 CCAR2Q8N163 923 aaKnown RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 C17orf53Q8N3J3 647 aaPredicted RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 GCSAMQ8N6F7 178 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 ANKRD13CQ8N6S4 541 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TEX9Q8N6V9 391 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 DRAXINQ8NBI3 349 aaPredicted RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 ANKRD20A12PQ8NF67 263 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 SLC24A4Q8NFF2 622 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 USP6NLQ92738 828 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 CALML4Q96GE6 196 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 JAKMIP1Q96N16 626 aaKnown RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 ZNF583Q96ND8 569 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 DUX3Q96PT4 197 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 PARK7Q99497 189 aaKnown RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 FSD1Q9BTV5 496 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 PIGMQ9H3S5 423 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 RABEP2Q9H5N1 569 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 EPB41L5Q9HCM4 733 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 MTMR10Q9NXD2 777 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 EPS15L1Q9UBC2 864 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 CHORDC1Q9UHD1 332 aaPredicted RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 RPS6KA6Q9UK32 745 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 ZNF215Q9UL58 517 aaPredicted RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 TMCC3Q9ULS5 477 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TRIM17Q9Y577 477 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 PIAS3Q9Y6X2 628 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 KIAA1671Q9BY89 1806 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 SZT2Q5T011 3432 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
USP48-215ENST00000534705 RANBP2P49792 3224 aaKnown RBP3.27□□□□□ -1.89
USP48-215ENST00000534705 TRIOBPQ9H2D6 2365 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CCDC171Q6TFL3 1326 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 IGLV5-45A0A087WSX0 123 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 DVL1O14640 695 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CPLX1O14810 134 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PRKNO60260 465 aaPredicted RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 PRDM1O75626 825 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 SMC2O95347 1197 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 HIST1H2ABP04908 130 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 NR2F1P10589 423 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 EEF2P13639 858 aaKnown RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 CSF2RAP15509 400 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 HIST1H2ADP20671 130 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 KIF5BP33176 963 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PSMC4P43686 418 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CTSCP53634 463 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 DVL1P1P54792 670 aaPredicted RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 PRMT2P55345 433 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 RWDD2BP57060 319 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CREB5Q02930 508 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PRKCZQ05513 592 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 TMEM266Q2M3C6 531 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 MCMDC2Q4G0Z9 681 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 SNX30Q5VWJ9 437 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 JADE1Q6IE81 842 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 FAM171BQ6P995 826 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 C11orf88Q6PI97 169 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 LEKR1Q6ZMV7 388 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 RBM43Q6ZSC3 357 aaKnown RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 RAPH1Q70E73 1250 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 HIST3H2AQ7L7L0 130 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CCDC186Q7Z3E2 898 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PLA2G4DQ86XP0 818 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 TICAM1Q8IUC6 712 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 EPHX4Q8IUS5 362 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 TBC1D10CQ8IV04 446 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 CCDC112Q8NEF3 446 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 KLHDC9Q8NEP7 349 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 NEK11Q8NG66 645 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 OR8H1Q8NGG4 311 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 OR52I2Q8NH67 350 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 HMGCLL1Q8TB92 370 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 HM13Q8TCT9 377 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 LRRC8CQ8TDW0 803 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PPP4R1Q8TF05 950 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 SLC44A1Q8WWI5 657 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 SYAP1Q96A49 352 aaPredicted RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 JAKMIP2Q96AA8 810 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PHF21AQ96BD5 680 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 FAM120BQ96EK7 910 aaKnown RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 LINGO1Q96FE5 620 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 WDFY2Q96P53 400 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 SPAG5Q96R06 1193 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 POLR3CQ9BUI4 534 aaPredicted RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 C1QTNF1Q9BXJ1 281 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 XPO4Q9C0E2 1151 aaKnown RBP3.26□□□□□ -1.89
USP48-215ENST00000534705 OR10A4Q9H209 315 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 PORCNQ9H237 461 aa3.26□□□□□ -1.89
USP48-215ENST00000534705 RPAP3Q9H6T3 665 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms