RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ZNF304Q9HCX3 659 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 ATP13A2Q9NQ11 1180 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 TAS2R13Q9NYV9 303 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 TAC3Q9UHF0 121 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 TRMT6Q9UJA5 497 aaKnown RBP22.24■■□□□ 1.15
YIF1A-213ENST00000534374 PLAAQ9Y263 795 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 PCSK5Q92824 1860 aa22.24■■□□□ 1.15
YIF1A-213ENST00000534374 PRRC2CQ9Y520 2896 aaKnown RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 IGKV1-8A0A0C4DH67 115 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 TTLL8A6PVC2 850 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 H0YGG7 62 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 NRP2O60462 931 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 SYF2O95926 243 aaKnown RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 AHSGP02765 367 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 EIF2S1P05198 315 aaKnown RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 GABRB3P28472 473 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 OR1D4P47884 311 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 ARF3P61204 181 aaPredicted RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 TIAL1Q01085 375 aaKnown RBP eCLIP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 MYBPC3Q14896 1274 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 BBS9Q3SYG4 887 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 NADK2Q4G0N4 442 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 VWA5B1Q5TIE3 1220 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 UBE2R2Q712K3 238 aaPredicted RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 IGDCC3Q8IVU1 814 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 GALNT16Q8N428 558 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 MCOLN3Q8TDD5 553 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 LRRC39Q96DD0 335 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 NAPGQ99747 312 aaPredicted RBP22.23■■□□□ 1.15
YIF1A-213ENST00000534374 RNF14Q9UBS8 474 aa22.23■■□□□ 1.15
YIF1A-213ENST00000534374 DOPEY2Q9Y3R5 2298 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 COL12A1Q99715 3063 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 CCDC188H7C350 402 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 TXNDC9O14530 226 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 RGS4P49798 205 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 FOXL2P58012 376 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 DR1Q01658 176 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 TSTA3Q13630 321 aaPredicted RBP22.22■■□□□ 1.15
YIF1A-213ENST00000534374 GARNL3Q5VVW2 1013 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 PIWIL4Q7Z3Z4 852 aaKnown RBP22.22■■□□□ 1.15
YIF1A-213ENST00000534374 ATCAYQ86WG3 371 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 KLHL7Q8IXQ5 586 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 PPFIBP2Q8ND30 876 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 MVB12AQ96EY5 273 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 CERS2Q96G23 380 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 VPS50Q96JG6 964 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 CAPZA3Q96KX2 299 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 CCDC138Q96M89 665 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 OR2A5Q96R48 311 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 SEMA3GQ9NS98 782 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 CDC14AQ9UNH5 594 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 DOCK10Q96BY6 2186 aa22.22■■□□□ 1.15
YIF1A-213ENST00000534374 LRRK2Q5S007 2527 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 SLC16A5O15375 505 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 BANF1O75531 89 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 SORBS2O94875 1100 aaKnown RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 MED26O95402 600 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 ALPPP05187 535 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 C8GP07360 202 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 EZRP15311 586 aaKnown RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 HRH2P25021 359 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 IMPA1P29218 277 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 PAFAH1B1P43034 410 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 CARSP49589 748 aaKnown RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 AIMP2Q13155 320 aaKnown RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 TEDDM1Q5T9Z0 273 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 HIBCHQ6NVY1 386 aaPredicted RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 JMJD6Q6NYC1 403 aaPredicted RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 IGFL3Q6UXB1 125 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 TMEM151BQ8IW70 566 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 RBMXL3Q8N7X1 1067 aaKnown RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 EEF1AKMT1Q8WVE0 214 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 NDNQ99608 321 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 ZNF552Q9H707 407 aaPredicted RBP22.21■■□□□ 1.15
YIF1A-213ENST00000534374 CDC23Q9UJX2 597 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 MAU2Q9Y6X3 613 aa22.21■■□□□ 1.15
YIF1A-213ENST00000534374 IGLV3-12A0A075B6K2 115 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 IPO13O94829 963 aaKnown RBP22.2■■□□□ 1.14
YIF1A-213ENST00000534374 ELK3P41970 407 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 OCA2Q04671 838 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PAQR3Q6TCH7 311 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 SPNS2Q8IVW8 549 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PALM2Q8IXS6 379 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 CSNK1A1LQ8N752 337 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 CPT1CQ8TCG5 803 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 RERGQ96A58 199 aaPredicted RBP22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PNPLA2Q96AD5 504 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 C10orf90Q96M02 699 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PCBD2Q9H0N5 130 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PARVBQ9HBI1 364 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 PLAC1Q9HBJ0 212 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 CTSFQ9UBX1 484 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 ZNF282Q9UDV7 671 aaPredicted RBP22.2■■□□□ 1.14
YIF1A-213ENST00000534374 CORO1CQ9ULV4 474 aaPredicted RBP22.2■■□□□ 1.14
YIF1A-213ENST00000534374 TEX264Q9Y6I9 313 aa22.2■■□□□ 1.14
YIF1A-213ENST00000534374 SOCS6O14544 535 aa22.19■■□□□ 1.14
YIF1A-213ENST00000534374 VARSP26640 1264 aaKnown RBP22.19■■□□□ 1.14
YIF1A-213ENST00000534374 SP140Q13342 867 aa22.19■■□□□ 1.14
YIF1A-213ENST00000534374 FRG1Q14331 258 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms