RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PDPK1O15530 556 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 MMP20O60882 483 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 POP7O75817 140 aaKnown RBP16.78■□□□□ 0.28
PHRF1-206ENST00000534320 HIST1H2ABP04908 130 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 GLDCP23378 1020 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 PHC1P78364 1004 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 EMX2Q04743 252 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 Q6ZVL8 140 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 HIST3H2AQ7L7L0 130 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 SLC9A6Q92581 669 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 HIST1H2ACQ93077 130 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 TESMINQ9Y4I5 508 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 FADS2P1A8MWK0 482 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 TGFB1P01137 390 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 MAGEA6P43360 314 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 YAP1P46937 504 aaKnown RBP16.78■□□□□ 0.28
PHRF1-206ENST00000534320 ATP4BP51164 291 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 CDKN2DP55273 166 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 CDH12P55289 794 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 PPP1R3AQ16821 1122 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 IFI44LQ53G44 452 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 PRAMEF14Q5SWL7 426 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 PRAMEF13Q5VWM6 474 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 OTUB2Q96DC9 234 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 LMAN2LQ9H0V9 348 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 EI24O14681 340 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 FAM189A1O60320 539 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 LATS1O95835 1130 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 NR2F6P10588 404 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 RPL4P36578 427 aaKnown RBP16.78■□□□□ 0.28
PHRF1-206ENST00000534320 BTN3A2P78410 334 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 LRRTM4Q86VH4 590 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 C1orf52Q8N6N3 182 aaKnown RBP16.78■□□□□ 0.28
PHRF1-206ENST00000534320 MOCOSQ96EN8 888 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 CEP295NLQ96MC4 621 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 MCCC1Q96RQ3 725 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-206ENST00000534320 MCUBQ9NWR8 336 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 HEBP2Q9Y5Z4 205 aa16.78■□□□□ 0.28
PHRF1-206ENST00000534320 PDLIM1O00151 329 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 RGS10O43665 173 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 APOL3O95236 402 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 TIE1P35590 1138 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 EIF2S3P41091 472 aaKnown RBP16.77■□□□□ 0.28
PHRF1-206ENST00000534320 SP140Q13342 867 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 CARTPTQ16568 116 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 SPIN4Q56A73 249 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 OR4F3Q6IEY1 312 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 SPAG16Q8N0X2 631 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 RACGAP1Q9H0H5 632 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 SRMSQ9H3Y6 488 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 MRPS30Q9NP92 439 aaKnown RBP16.77■□□□□ 0.28
PHRF1-206ENST00000534320 WWP2O00308 870 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 BCAS2O75934 225 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-206ENST00000534320 PRKD3O94806 890 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 ITGA3P26006 1051 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 CCR8P51685 355 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 TRNP1Q6NT89 227 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 FAM92BQ6ZTR7 304 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 RNF44Q7L0R7 432 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 ZNF382Q96SR6 550 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 RAD9AQ99638 391 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 PRDM8Q9NQV8 689 aa16.77■□□□□ 0.28
PHRF1-206ENST00000534320 A0A1W2PRB8 838 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 PLK4O00444 970 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 RHOP08100 348 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 SMCO1Q147U7 214 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 DCST1Q5T197 706 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 PSAPL1Q6NUJ1 521 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 AGTRAPQ6RW13 159 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 SLC39A5Q6ZMH5 540 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 MBOAT1Q6ZNC8 495 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 ZBED6CLQ96FA7 236 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-206ENST00000534320 FAM129BQ96TA1 746 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 SPHK2Q9NRA0 654 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 BCORQ6W2J9 1755 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 CLIC1O00299 241 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 PRR5P85299 388 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 RHDQ02161 417 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.77■□□□□ 0.27
PHRF1-206ENST00000534320 DPY19L3Q6ZPD9 716 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 OR5K1Q8NHB7 308 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 NSUN5Q96P11 429 aaKnown RBP16.77■□□□□ 0.27
PHRF1-206ENST00000534320 CSNK1G1Q9HCP0 422 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 ACTR3BQ9P1U1 418 aa16.77■□□□□ 0.27
PHRF1-206ENST00000534320 NDRG2Q9UN36 371 aaKnown RBP16.77■□□□□ 0.27
PHRF1-206ENST00000534320 SNNO75324 88 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-206ENST00000534320 GGT5P36269 586 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 C1QTNF8P60827 252 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 NUP50Q9UKX7 468 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 PEX16Q9Y5Y5 336 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 NT5EP21589 574 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 UNC50Q53HI1 259 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 ZNF730Q6ZMV8 503 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 SCML4Q8N228 414 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 PHF12Q96QT6 1004 aa16.76■□□□□ 0.27
PHRF1-206ENST00000534320 PKP2Q99959 881 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms