RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 DOLKQ9UPQ8 538 aa11.84□□□□□ -0.51
TGFBR3-211ENST00000533370 CCL27Q9Y4X3 112 aa11.84□□□□□ -0.51
TGFBR3-211ENST00000533370 CSNK1G3Q9Y6M4 447 aa11.84□□□□□ -0.51
TGFBR3-211ENST00000533370 ATP6AP2A0A1C7CYW4 349 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 GPR37L1O60883 481 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ATP6AP2O75787 350 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 CCNDBP1O95273 360 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 PDYNP01213 254 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ANXA6P08133 673 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 PRR35P0CG20 571 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 SP9P0CG40 484 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 HSD3B1P14060 373 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 PCSK2P16519 638 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 HRH2P25021 359 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 CXCR2P25025 360 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 HSD3B2P26439 372 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 HOXD12P35452 270 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 RXRGP48443 463 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 HTR6P50406 440 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ATP4BP51164 291 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 CCR8P51685 355 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 KIF19Q2TAC6 998 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ATP6AP1LQ52LC2 224 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 SGO1Q5FBB7 561 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 TCHHL1Q5QJ38 904 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 CATSPEREQ5SY80 951 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 OGFOD2Q6N063 350 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 MED27Q6P2C8 311 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 RABEPKQ7Z6M1 372 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 SYT12Q8IV01 421 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 NAGSQ8N159 534 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 KRT78Q8N1N4 520 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 LMNTD1Q8N9Z9 388 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 OR4K1Q8NGD4 311 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 OR2A1Q8NGT9 310 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 SELENOMQ8WWX9 145 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 MTFMTQ96DP5 389 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 PPP3R2Q96LZ3 170 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 TWSG1Q9GZX9 223 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 NT5DC2Q9H857 520 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ARMCX1Q9P291 453 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 TAC3Q9UHF0 121 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 ADGRE2Q9UHX3 823 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 TSC22D4Q9Y3Q8 395 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 PTGDR2Q9Y5Y4 395 aa11.83□□□□□ -0.52
TGFBR3-211ENST00000533370 FAM221BA6H8Z2 402 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 NPIPB8E9PQR5 432 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 FOXE1O00358 373 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 DFNA5O60443 496 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 HNRNPCL1O60812 293 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 PEX11AO75192 247 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 PIAS2O75928 621 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CHRM5P08912 532 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CDH1P12830 882 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CD22P20273 847 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 PRDX6P30041 224 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ARRB1P49407 418 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 MNAT1P51948 309 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 NEK2P51955 445 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 HNRNPH2P55795 449 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 EMX2Q04743 252 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CSTF3Q12996 717 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 GRIK2Q13002 908 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 KLF10Q13118 480 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 MAD2L1Q13257 205 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 UBAP2LQ14157 1087 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 GPR18Q14330 331 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 KIR2DS3Q14952 304 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 GSTA3Q16772 222 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 IMPG1Q17R60 797 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 C6orf136Q5SQH8 315 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 PEAR1Q5VY43 1037 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ICE2Q659A1 982 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 TMEM198Q66K66 360 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 TMPRSS11BQ86T26 416 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 C17orf82Q86X59 251 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 FAM129CQ86XR2 697 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 LAS2Q8IYD9 372 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ADGRF3Q8IZF5 1079 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ZBTB44Q8NCP5 570 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ZNF548Q8NEK5 533 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 OR7G3Q8NG95 312 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 OR2T11Q8NH01 316 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CEP76Q8TAP6 659 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 WDR20Q8TBZ3 569 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 SLC37A2Q8TED4 501 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CMTM5Q96DZ9 223 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CMTM7Q96FZ5 175 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 PRR11Q96HE9 360 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 METTL2AQ96IZ6 378 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CATSPER2Q96P56 530 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 NRTNQ99748 197 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 AIF1LQ9BQI0 150 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 ACAT2Q9BWD1 397 aa11.82□□□□□ -0.52
TGFBR3-211ENST00000533370 CAAP1Q9H8G2 361 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms