RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TDRPQ86YL5 185 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 MCATQ8IVS2 390 aaKnown RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 KLHDC8AQ8IYD2 350 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 RHEBL1Q8TAI7 183 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 STAG3L4Q8TBR4 150 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 MZB1Q8WU39 189 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 NKD1Q969G9 470 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 MTBPQ96DY7 904 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM79Q9BSE2 394 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 DPH1Q9BZG8 443 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SPRTNQ9H040 489 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF358Q9NW07 568 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SERTAD3Q9UJW9 196 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SNX7Q9UNH6 387 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SNRNP200O75643 2136 aaKnown RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 IQANK1A0A1B0GTG1 560 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 CCDC189A1A4V9 331 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 H7BY64 318 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 UBXN8O00124 270 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 HAT1O14929 419 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 RRP8O43159 456 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SCRG1O75711 98 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 NTRK1P04629 796 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 TUBBP07437 444 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 NUDT17P0C025 328 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 COL6A2P12110 1019 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 MTHFD2P13995 350 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 GGT5P36269 586 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SLCO1A2P46721 670 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SLC6A12P48065 614 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 GLRBP48167 497 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 RELAQ04206 551 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 MAP7Q14244 749 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 RASA2Q15283 850 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 ZC3H12BQ5HYM0 836 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 FRMPD2BQ6IN97 320 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 THOC6Q86W42 341 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 C17orf64Q86WR6 236 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM126BQ8IUX1 230 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SPACA3Q8IXA5 215 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 MREGQ8N565 214 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SLC38A9Q8NBW4 561 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 OR2W6PQ8NHA6 318 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 EXT2Q93063 718 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF285Q96NJ3 590 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 PRAP1Q96NZ9 151 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 ZFYVE21Q9BQ24 234 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SYNPO2LQ9H987 977 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 PPCSQ9HAB8 311 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 ENAMQ9NRM1 1142 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM184CQ9NVA4 438 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 NUDT4Q9NZJ9 180 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 CD274Q9NZQ7 290 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 PTBP2Q9UKA9 531 aaKnown RBP11.49□□□□□ -0.57
SSBP3-214ENST00000533209 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
SSBP3-214ENST00000533209 SDK2Q58EX2 2172 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 PKD1L2Q7Z442 2459 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 LOC105369274A0A096LPK9 316 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 LOC102723532A0A0G2JNH3 316 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 A0A0J9YVX5 310 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 SMIM23A6NLE4 172 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 SUPT3HB4E1H0 165 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 E7EQ34 232 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 KLK10O43240 276 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF749O43361 778 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CPNE3O75131 537 aaKnown RBP11.48□□□□□ -0.57
SSBP3-214ENST00000533209 SUPT3HO75486 399 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 OR2B3O76000 313 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CDH1P12830 882 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 EZRP15311 586 aaKnown RBP11.48□□□□□ -0.57
SSBP3-214ENST00000533209 HRH2P25021 359 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 ITPKBP27987 946 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 GDF5P43026 501 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 GCGRP47871 477 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 VSX2P58304 361 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CSNK1G2P78368 415 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 TLE3Q04726 772 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 FBXO48Q5FWF7 155 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 TECRLQ5HYJ1 363 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 KLC3Q6P597 504 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 C6orf15Q6UXA7 325 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-214ENST00000533209 ADCK2Q7Z695 626 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 GPR135Q8IZ08 494 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CACNA2D3Q8IZS8 1091 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 NLGN4XQ8N0W4 816 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 OR4N4Q8N0Y3 316 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 TCAIMQ8N3R3 496 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms