RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 AGAP7PQ5VUJ5 663 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 TMEM236Q5W0B7 351 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 NOXRED1Q6NXP6 359 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 FAHD1Q6P587 224 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 CBLL1Q75N03 491 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 GPR155Q7Z3F1 870 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 WFDC5Q8TCV5 224 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 EGLN2Q96KS0 407 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 APOLD1Q96LR9 279 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 PANX1Q96RD7 426 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 REXO4Q9GZR2 422 aaKnown RBP12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 REEP1Q9H902 201 aa12.71□□□□□ -0.37
GRAMD1B-208ENST00000532581 CLDN24A6NM45 220 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 TTC34A8MYJ7 566 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 SMAD6O43541 496 aaKnown RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 CCR7P32248 378 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 PLD1Q13393 1074 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 ZXDCQ2QGD7 858 aaPredicted RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 PLEKHG7Q6ZR37 379 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 VTCN1Q7Z7D3 282 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 PTOV1Q86YD1 416 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 ATG16L2Q8NAA4 619 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 HSH2DQ96JZ2 352 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 MAGEB10Q96LZ2 347 aaPredicted RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 SIGLEC11Q96RL6 698 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 LYSMD1Q96S90 227 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 RHNO1Q9BSD3 238 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 MRPL9Q9BYD2 267 aaKnown RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 ALOXE3Q9BYJ1 711 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 SLIRPQ9GZT3 109 aaKnown RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 AFF4Q9UHB7 1163 aaKnown RBP12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 TRIM17Q9Y577 477 aa12.71□□□□□ -0.38
GRAMD1B-208ENST00000532581 OR2A25A4D2G3 310 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 MAGEB17A8MXT2 336 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 E9PQ18 207 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 GFRA2O00451 464 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 CNOT3O75175 753 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 DIRAS1O95057 198 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 SEC24AO95486 1093 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 AOAHP28039 575 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 TGFBR2P37173 567 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 CSNK2BP67870 215 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 FRG2Q64ET8 278 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 GPR26Q8NDV2 337 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 FRG2BQ96QU4 278 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 COPS8Q99627 209 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 FAM120CQ9NX05 1096 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 THUMPD1Q9NXG2 353 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 OSGIN1Q9UJX0 560 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 BACE2Q9Y5Z0 518 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 PABPN1LA6NDY0 278 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 AQP9O43315 295 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 HIST1H2AGP0C0S8 130 aaPredicted RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 HIST1H2ADP20671 130 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 EPHA2P29317 976 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 GKP32189 559 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 VEZF1Q14119 521 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 TAF12Q16514 161 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 APCDD1Q8J025 514 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 CADM3Q8N126 398 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 FCGR1BQ92637 280 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 HIST1H2AHQ96KK5 128 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 HIST1H2AJQ99878 128 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 SLX1AQ9BQ83 275 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 SPATA9Q9BWV2 254 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 ITGB1BP2Q9UKP3 347 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 PIKFYVEQ9Y2I7 2098 aa12.7□□□□□ -0.38
GRAMD1B-208ENST00000532581 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 HOXA2O43364 376 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 NUAK1O60285 661 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 NBNO60934 754 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 SCN2BO60939 215 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 FKBP9O95302 570 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 IGSF6O95976 241 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 C9P02748 559 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 CD36P16671 472 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 PPP3CCP48454 512 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 WNT3P56703 355 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 B4GALNT1Q00973 533 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 NPRL3Q12980 569 aa12.69□□□□□ -0.38
GRAMD1B-208ENST00000532581 SP140Q13342 867 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms