RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 PROKR1Q8TCW9 393 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 ALKBH8Q96BT7 664 aaKnown RBP14.84□□□□□ -0.03
CTSB-225ENST00000532409 ABHD17AQ96GS6 310 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 DPH2Q9BQC3 489 aaPredicted RBP14.84□□□□□ -0.03
CTSB-225ENST00000532409 PLCD4Q9BRC7 762 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 LRRC1Q9BTT6 524 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 SLC25A18Q9H1K4 315 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 ADNPQ9H2P0 1102 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 PARVBQ9HBI1 364 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 CUTCQ9NTM9 273 aa14.84□□□□□ -0.03
CTSB-225ENST00000532409 IFT80Q9P2H3 777 aaPredicted RBP14.84□□□□□ -0.03
CTSB-225ENST00000532409 UTP11Q9Y3A2 253 aaKnown RBP14.84□□□□□ -0.03
CTSB-225ENST00000532409 MDC1Q14676 2089 aaKnown RBP14.84□□□□□ -0.03
CTSB-225ENST00000532409 FAM95CA0A1B0GW59 222 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 TCRBV9S1A1TA0A576 114 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 B8ZZF3 427 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 H0YGG7 62 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 PLA2G2AP14555 144 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 OTX2P32243 289 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 OR1D4P47884 311 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 PMS2P54278 862 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 TAS2R39P59534 338 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 IL2P60568 153 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 ARF3P61204 181 aaPredicted RBP14.83□□□□□ -0.04
CTSB-225ENST00000532409 SNRPNP63162 240 aaKnown RBP14.83□□□□□ -0.04
CTSB-225ENST00000532409 CKAP4Q07065 602 aaKnown RBP14.83□□□□□ -0.04
CTSB-225ENST00000532409 GRM7Q14831 915 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 COX15Q7KZN9 410 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 ADCK2Q7Z695 626 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 ZNF605Q86T29 641 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 CEP97Q8IW35 865 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 MCOLN3Q8TDD5 553 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 ZFYVE21Q9BQ24 234 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 MCMBPQ9BTE3 642 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 CORO1CQ9ULV4 474 aaPredicted RBP14.83□□□□□ -0.04
CTSB-225ENST00000532409 PTRH2Q9Y3E5 179 aaKnown RBP14.83□□□□□ -0.04
CTSB-225ENST00000532409 MAU2Q9Y6X3 613 aa14.83□□□□□ -0.04
CTSB-225ENST00000532409 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 A0A1B0GX78 115 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 HYKKA2RU49 373 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 FITM1A5D6W6 292 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 ZNF839A8K0R7 811 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 H7BY64 318 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 MASP2O00187 686 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 CDC7O00311 574 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 NDC80O14777 642 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 HAT1O14929 419 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 DSCR3O14972 297 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 RECKO95980 971 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 C1QAP02745 245 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 PDGFAP04085 211 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 SP140Q13342 867 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 NAE1Q13564 534 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 ATP1A4Q13733 1029 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 HKDC1Q2TB90 917 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 TCTE1Q5JU00 501 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 PRAMEF13Q5VWM6 474 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 LRRC8EQ6NSJ5 796 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 MRPL14Q6P1L8 145 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 AGTRAPQ6RW13 159 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 SHISA6Q6ZSJ9 500 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 SLC26A11Q86WA9 606 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 NOA1Q8NC60 698 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 C9orf43Q8TAL5 461 aaPredicted RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 ANKRD49Q8WVL7 239 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 PYCR2Q96C36 320 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 VPS39Q96JC1 886 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 C10orf90Q96M02 699 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 CCDC138Q96M89 665 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 PRAP1Q96NZ9 151 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 UNKQ9C0B0 810 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 RAB17Q9H0T7 212 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 RHOJQ9H4E5 214 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 CAB39LQ9H9S4 337 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 CCDC177Q9NQR7 707 aaPredicted RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 UTP6Q9NYH9 597 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 CTSFQ9UBX1 484 aa14.82□□□□□ -0.04
CTSB-225ENST00000532409 GPN3Q9UHW5 284 aaPredicted RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 MTO1Q9Y2Z2 717 aaKnown RBP14.82□□□□□ -0.04
CTSB-225ENST00000532409 NPEPPSL1A6NEC2 478 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 FFAR3O14843 346 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
CTSB-225ENST00000532409 SLC16A5O15375 505 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 GPR42O15529 346 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 P2RX6O15547 441 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 SRPX2O60687 465 aaPredicted RBP14.81□□□□□ -0.04
CTSB-225ENST00000532409 RFPL1O75677 317 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 GUCA1CO95843 209 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 UMODP07911 640 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 ZNF37AP17032 561 aaPredicted RBP14.81□□□□□ -0.04
CTSB-225ENST00000532409 GMPRP36959 345 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 ARSFP54793 590 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.043e-6■■■■□ 19.5
CTSB-225ENST00000532409 PRTGQ2VWP7 1150 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 UBAP2Q5T6F2 1119 aaKnown RBP14.81□□□□□ -0.04
CTSB-225ENST00000532409 C8orf74Q6P047 294 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 SBSNQ6UWP8 590 aa14.81□□□□□ -0.04
CTSB-225ENST00000532409 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms