RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ZNF234Q14588 700 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 MAPK11Q15759 364 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 UGT3A2Q3SY77 523 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 XKR9Q5GH70 373 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 FAM166AQ6J272 317 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 NEK5Q6P3R8 708 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 PLXDC2Q6UX71 529 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 MFSD7Q6UXD7 560 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 PLEKHM3Q6ZWE6 761 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ADCK1Q86TW2 530 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 CFAP206Q8IYR0 622 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ZBTB44Q8NCP5 570 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 NPEPL1Q8NDH3 523 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 OR13J1Q8NGT2 312 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 FGFBP3Q8TAT2 258 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 IRGQQ8WZA9 623 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 TMEM186Q96B77 213 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 WBP1Q96G27 269 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ZNF560Q96MR9 790 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 NAP1L5Q96NT1 182 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 OR1F2PQ96R84 312 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 NAP1L3Q99457 506 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 PKP2Q99959 881 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 PRRG4Q9BZD6 226 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ZNF556Q9HAH1 456 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 SYTL2Q9HCH5 934 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 GKN1Q9NS71 199 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 TRIM10Q9UDY6 481 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 A0A0B4J203 849 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 FAM149AA5PLN7 773 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 C5orf60A6NFR6 353 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ZNHIT1O43257 154 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 KCNJ13O60928 360 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 RNASEH1O60930 286 aaKnown RBP4.1□□□□□ -1.75
USP47-211ENST00000531513 LDB3O75112 727 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 SOCS5O75159 536 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 TFAP2AP05549 437 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 KRT19P08727 400 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 CCDC192P0DO97 292 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ACP2P11117 423 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ETS1P14921 441 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 CBLP22681 906 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 JAK1P23458 1154 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 PCYT1AP49585 367 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ART1P52961 327 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 BNC1Q01954 994 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 AKAP17AQ02040 695 aaKnown RBP4.1□□□□□ -1.75
USP47-211ENST00000531513 SULT2A1Q06520 285 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 GTF2H2Q13888 395 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 TAF7Q15545 349 aaPredicted RBP4.1□□□□□ -1.75
USP47-211ENST00000531513 CALCRLQ16602 461 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ELFN2Q5R3F8 820 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 CYP4A22Q5TCH4 519 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 NDUFAF5Q5TEU4 345 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 FAM46CQ5VWP2 391 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 FBXL22Q6P050 247 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 GTF2H2CQ6P1K8 395 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 RAD9BQ6WBX8 426 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ASB18Q6ZVZ8 466 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ANKRD33Q7Z3H0 272 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ELMOD2Q8IZ81 293 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 KIAA0895Q8NCT3 520 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 SLC20A1Q8WUM9 679 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 PGM2Q96G03 612 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 CFAP36Q96G28 342 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 SCMH1Q96GD3 660 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 EPSTI1Q96J88 318 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 FAM71F1Q96KD3 344 aaPredicted RBP4.1□□□□□ -1.75
USP47-211ENST00000531513 SGK494Q96LW2 274 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ZNF559Q9BR84 538 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ACPTQ9BZG2 426 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 NYXQ9GZU5 481 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ARRDC1-AS1Q9H2J1 176 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 MAGEF1Q9HAY2 307 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 ZNF701Q9NV72 531 aaPredicted RBP4.1□□□□□ -1.75
USP47-211ENST00000531513 SMARCAL1Q9NZC9 954 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 CCPG1Q9ULG6 757 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 OR2W1Q9Y3N9 320 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 TMED3Q9Y3Q3 217 aa4.1□□□□□ -1.75
USP47-211ENST00000531513 EVPLQ92817 2033 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 C2orf92A0A1B0GVN3 265 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 LINC01553A4QN01 128 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TMEM150CB9EJG8 249 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 PRSS46E5RG02 174 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 H0YIG0 161 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 K7EPI3 171 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 GAPDHSO14556 408 aaPredicted RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 SNX3O60493 162 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SMPD2O60906 423 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 PRDM1O75626 825 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 KDM4BO94953 1096 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TRIM16O95361 564 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 LIPFP07098 398 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 STAG3L1P0CL83 205 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 HSPA8P11142 646 aaKnown RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 GNL1P36915 607 aaPredicted RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 OR3A1P47881 315 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms