RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 KCNA7Q96RP8 456 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 KLHL25Q9H0H3 589 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 RABEP2Q9H5N1 569 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 FGFR1OP2Q9NVK5 253 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 GPRC5BQ9NZH0 403 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 ZNF225Q9UK10 706 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 RAP2CQ9Y3L5 183 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 TMEM233B4DJY2 109 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CLDN9O95484 217 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 ESRRBO95718 433 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 SERPINB3P29508 390 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CMPK1P30085 196 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 PKNOX1P55347 436 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 DOC2AQ14183 400 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 KIAA1614Q5VZ46 1190 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CLEC6AQ6EIG7 209 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 SPESP1Q6UW49 350 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 NXPE4Q6UWF7 544 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 SLCO4C1Q6ZQN7 724 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 FAM92BQ6ZTR7 304 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CRLF3Q8IUI8 442 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 FLVCR1-AS1Q8TAF5 88 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 THOC1Q96FV9 657 aaKnown RBP18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CHMP6Q96FZ7 201 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 TGM7Q96PF1 710 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 CCDC3Q9BQI4 270 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 FAM107BQ9H098 131 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 ABCG4Q9H172 646 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 PRM3Q9NNZ6 103 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 EVA1BQ9NVM1 165 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 KLHL3Q9UH77 587 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 ENTPD2Q9Y5L3 495 aa18.34■□□□□ 0.53
SMPD1-205ENST00000531303 FFAR3O14843 346 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CAPN5O15484 640 aaPredicted RBP18.33■□□□□ 0.53
SMPD1-205ENST00000531303 GPR42O15529 346 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 DUX1O43812 170 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 EDF1O60869 148 aaKnown RBP18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CCNDBP1O95273 360 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 C1GALT1C1LP0DN25 315 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 PVRP15151 417 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CKMT2P17540 419 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CD1CP29017 333 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 FOXA1P55317 472 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 GFERP55789 205 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CCL7P80098 99 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 NR1D2Q14995 579 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CPSF6Q16630 551 aaKnown RBP eCLIP18.33■□□□□ 0.53
SMPD1-205ENST00000531303 CCDC157Q569K6 752 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 STPG1Q5TH74 334 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 C7orf26Q96N11 449 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 ZNF317Q96PQ6 595 aaPredicted RBP18.33■□□□□ 0.53
SMPD1-205ENST00000531303 DPH7Q9BTV6 452 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 NTMT1Q9BV86 223 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 SLC6A20Q9NP91 592 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 STK38LQ9Y2H1 464 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 TRAF6Q9Y4K3 522 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 TIMM22Q9Y584 194 aa18.33■□□□□ 0.53
SMPD1-205ENST00000531303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 GMNCA6NCL1 334 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 AZIN1O14977 448 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 ZW10O43264 779 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 RPLP0P05388 317 aaKnown RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 CAPN1P07384 714 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 EBLN1P0CF75 366 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 HGFP14210 728 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 PNLIPP16233 465 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 LSSP48449 732 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 RPL14P50914 215 aaKnown RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 CCR8P51685 355 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 ABATP80404 500 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 CBX1P83916 185 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 GALNT1Q10472 559 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 SLBPQ14493 270 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 SGO1Q5FBB7 561 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 TCHHL1Q5QJ38 904 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 METTL6Q8TCB7 284 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 POMT2Q9UKY4 750 aa18.33■□□□□ 0.52
SMPD1-205ENST00000531303 ATXN7L1Q9ULK2 861 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-205ENST00000531303 IGKV1-8A0A0C4DH67 115 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 MATN2O00339 956 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 KIF1CO43896 1103 aaKnown RBP18.32■□□□□ 0.52
SMPD1-205ENST00000531303 NRP2O60462 931 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 FOXD2O60548 495 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-205ENST00000531303 WFS1O76024 890 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 CD22P20273 847 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 CDH3P22223 829 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 GPLD1P80108 840 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 CFHR1Q03591 330 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 SLC5A12Q1EHB4 618 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 SNAP47Q5SQN1 464 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 ATG9BQ674R7 924 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 ZNF740Q8NDX6 193 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 GRAMD1AQ96CP6 724 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 MTFMTQ96DP5 389 aaKnown RBP18.32■□□□□ 0.52
SMPD1-205ENST00000531303 PTCD3Q96EY7 689 aaKnown RBP18.32■□□□□ 0.52
SMPD1-205ENST00000531303 TWSG1Q9GZX9 223 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 SPNS1Q9H2V7 528 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 GEMIN8Q9NWZ8 242 aaKnown RBP18.32■□□□□ 0.52
SMPD1-205ENST00000531303 TMEM9Q9P0T7 183 aa18.32■□□□□ 0.52
SMPD1-205ENST00000531303 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms