RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	OR5M9	Q8NGP3	310 aa		11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	SECISBP2	Q96T21	854 aa	Known RBP	11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	AGPAT1	Q99943	283 aa		11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	SLC25A51	Q9H1U9	297 aa		11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	KCNK13	Q9HB14	408 aa		11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	HOOK1	Q9UJC3	728 aa	Known RBP	11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	VPS9D1	Q9Y2B5	631 aa		11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	PRKDC	P78527	4128 aa	Known RBP	11.03	□□□□□ -0.64
PSMD13-209	ENST00000529372	LOC285095	A0A1B0GVY8	99 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	NPIPA2	E9PIF3	369 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	NPIPA3	F8WFD2	350 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	DDX3X	O00571	662 aa	Known RBP eCLIP	11.02	□□□□□ -0.65	4e-16	■■■■□ 25.1
PSMD13-209	ENST00000529372	SMPD2	O60906	423 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	CNOT4	O95628	575 aa	Known RBP	11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	NID1	P14543	1247 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	PKLR	P30613	574 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	CHRNA4	P43681	627 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	MESD	Q14696	234 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	SYT16	Q17RD7	645 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	CATSPERE	Q5SY80	951 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	SULF2	Q8IWU5	870 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	TBC1D21	Q8IYX1	336 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	OR5K2	Q8NHB8	316 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	PPP1R14C	Q8TAE6	165 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	RNASE6	Q93091	150 aa	Known RBP	11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	C19orf24	Q9BVV8	132 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	VN1R1	Q9GZP7	353 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	MMP25	Q9NPA2	562 aa		11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	LUC7L	Q9NQ29	371 aa	Known RBP	11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.02	□□□□□ -0.65
PSMD13-209	ENST00000529372	GOSR1	O95249	250 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	SNRPN	P63162	240 aa	Known RBP	11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	XIAP	P98170	497 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	PPID	Q08752	370 aa	Known RBP	11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	DPYSL3	Q14195	570 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	GRB7	Q14451	532 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	POU4F3	Q15319	338 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	MUM1	Q2TAK8	710 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	FILIP1L	Q4L180	1135 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	SIRPB2	Q5JXA9	342 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	CCDC122	Q5T0U0	273 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	FBXW10	Q5XX13	1052 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	POMZP3	Q6PJE2	187 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	MICALCL	Q6ZW33	695 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	PQLC3	Q8N755	202 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	LINC01560	Q8TB33	94 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	M1AP	Q8TC57	530 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	ZFYVE21	Q9BQ24	234 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	PLCD4	Q9BRC7	762 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	ATG10	Q9H0Y0	220 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	ASF1A	Q9Y294	204 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	TDRKH	Q9Y2W6	561 aa	Known RBP	11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	KLK4	Q9Y5K2	254 aa		11.01	□□□□□ -0.65
PSMD13-209	ENST00000529372	ARHGAP21	Q5T5U3	1957 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	IGLV3-16	A0A075B6K0	115 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	CDK2AP1	O14519	115 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	SPRY1	O43609	319 aa	Predicted RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	FOXS1	O43638	330 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	SRP72	O76094	671 aa	Known RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	ATP1B2	P14415	290 aa	Predicted RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	TPP2	P29144	1249 aa	Predicted RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	DMTN	Q08495	405 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	HSP90AA4P	Q58FG1	418 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	ZNF585A	Q6P3V2	769 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	SEM1	Q6ZVN7	128 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	RNF44	Q7L0R7	432 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	SLC13A5	Q86YT5	568 aa	Predicted RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	C2orf73	Q8N5S3	287 aa	Predicted RBP	11	□□□□□ -0.65
PSMD13-209	ENST00000529372	SLC5A8	Q8N695	610 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	MVB12A	Q96EY5	273 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	CYTH2	Q99418	400 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	DEFB127	Q9H1M4	99 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	ASB8	Q9H765	288 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	UBP1	Q9NZI7	540 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	POLG2	Q9UHN1	485 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	NPFFR2	Q9Y5X5	522 aa		11	□□□□□ -0.65
PSMD13-209	ENST00000529372	CR1	P17927	2039 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	OR2W5	A6NFC9	320 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	TUBAL3	A6NHL2	446 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	FIGNL2	A6NMB9	653 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	PEX1	O43933	1283 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	SOX30	O94993	753 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	AP2A1	O95782	977 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	MX2	P20592	715 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	TRHR	P34981	398 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	ASCL1	P50553	236 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	ITGA8	P53708	1063 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	EMP3	P54852	163 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	MAT1A	Q00266	395 aa	Known RBP	10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	RIPPLY2	Q5TAB7	128 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	GLT6D1	Q7Z4J2	308 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	ANKRD37	Q7Z713	158 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	NAXE	Q8NCW5	288 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	CCNY	Q8ND76	341 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	BLOC1S5	Q8TDH9	187 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	RNF25	Q96BH1	459 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	FAF2	Q96CS3	445 aa		10.99	□□□□□ -0.65
PSMD13-209	ENST00000529372	PERP	Q96FX8	193 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms