RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SCUBE1Q8IWY4 988 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SLC22A15Q8IZD6 547 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ZNF565Q8N9K5 539 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 HMGCLL1Q8TB92 370 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 UBTD2Q8WUN7 234 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 WDR60Q8WVS4 1066 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 HMGB4Q8WW32 186 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ZNF514Q96K75 400 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 MRGPRX1Q96LB2 322 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PHF7Q9BWX1 381 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 SLC17A9Q9BYT1 436 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 LRRK1Q38SD2 2015 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 DENND4AQ7Z401 1863 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 COL6A3P12111 3177 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 DOCK9Q9BZ29 2069 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 MGAT4DA6NG13 374 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SLC16A5O15375 505 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PLRG1O43660 514 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 ULK1O75385 1050 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PSIP1O75475 530 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 CIB2O75838 187 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 CLDN9O95484 217 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 APEHP13798 732 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 TMEM11P17152 192 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 NDUFV2P19404 249 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 POU3F3P20264 500 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 PRDX6P30041 224 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SOX11P35716 441 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 HNMTP50135 292 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 BLVRAP53004 296 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 TBL3Q12788 808 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 IMPG1Q17R60 797 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SIGIRRQ6IA17 410 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 AGTRAPQ6RW13 159 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 Q6ZS52 159 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 LRRTM4Q86VH4 590 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SLC38A6Q8IZM9 456 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 TCAIMQ8N3R3 496 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 KYQ8NBH2 561 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ZNF540Q8NDQ6 660 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 IL17RDQ8NFM7 739 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 HM13Q8TCT9 377 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 NRBF2Q96F24 287 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 COX14Q96I36 57 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PKP4Q99569 1192 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 RTKNQ9BST9 563 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 REPIN1Q9BWE0 567 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 EPHX3Q9H6B9 360 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PHPT1Q9NRX4 125 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 DNAJC11Q9NVH1 559 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 SLC23A2Q9UGH3 650 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ZNF490Q9ULM2 529 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 ASF1AQ9Y294 204 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 NCKAP1Q9Y2A7 1128 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 GON4LQ3T8J9 2241 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 C17orf113A0A1B0GUU1 675 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 OR5K4A6NMS3 321 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 SLC22A2O15244 555 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 VPS4BO75351 444 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 SORBS2O94875 1100 aaKnown RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 SNRPB2P08579 225 aaKnown RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 ACP5P13686 325 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 EPORP19235 508 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 ADSLP30566 484 aaPredicted RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 ACSL1P33121 698 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 PTGS2P35354 604 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 CBX5P45973 191 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 CDKL1Q00532 357 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 PRKG2Q13237 762 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 XKR7Q5GH72 579 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 C6orf136Q5SQH8 315 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 C1orf146Q5VVC0 180 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 Q6ZSR9 355 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 LRRC70Q7Z2Q7 622 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 HORMAD1Q86X24 394 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 DSELQ8IZU8 1212 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 MIER2Q8N344 545 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 SFRP1Q8N474 314 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 C2orf73Q8N5S3 287 aaPredicted RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 RNF148Q8N7C7 305 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 OR6C4Q8NGE1 309 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 OR2L2Q8NH16 312 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 DNASE1L2Q92874 299 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 PIP5K1AQ99755 562 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 MRPL1Q9BYD6 325 aaKnown RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 C1orf21Q9H246 121 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 INTS7Q9NVH2 962 aaKnown RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 STOX2Q9P2F5 926 aaPredicted RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 SLC7A8Q9UHI5 535 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 GPR34Q9UPC5 381 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 CA5BQ9Y2D0 317 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 TDRKHQ9Y2W6 561 aaKnown RBP7.47□□□□□ -1.21
SOX6-211ENST00000528429 CKAP5Q14008 2032 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 KNL1Q8NG31 2342 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 C1orf105O95561 183 aa7.47□□□□□ -1.21
SOX6-211ENST00000528429 EBLN1P0CF75 366 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms