RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DUX4L6P0CJ89 424 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 DUX4L7P0CJ90 424 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PTBP1P26599 531 aaKnown RBP eCLIP5.66□□□□□ -1.5
CD44-225ENST00000527326 PBLDP30039 288 aaPredicted RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 RPL22P35268 128 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 CD96P40200 585 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ACTR1BP42025 376 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CASP2P42575 452 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 SLC1A3P43003 542 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 LIG4P49917 911 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ATP4BP51164 291 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CYP2J2P51589 502 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 KPNA2P52292 529 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 SLC7A2P52569 658 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CDH13P55290 713 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 FCGRTP55899 365 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 EIF6P56537 245 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 NOMO3P69849 1222 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PSPHP78330 225 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CD47Q08722 323 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 SEMA5AQ13591 1074 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 FRG1Q14331 258 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 GRB7Q14451 532 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TIGD6Q17RP2 521 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MICBQ29980 383 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 RNF212Q495C1 297 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TRIM60Q495X7 471 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 KLHL26Q53HC5 615 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TFDP3Q5H9I0 405 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 GLRA4Q5JXX5 417 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CDKL4Q5MAI5 379 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 FAM182AQ5T1J6 154 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PDZK1Q5T2W1 519 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ZNF691Q5VV52 312 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 GLYATQ6IB77 296 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 EFCAB12Q6NXP0 572 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MZT2BQ6NZ67 158 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ERICH5Q6P6B1 374 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CNSTQ6PJW8 725 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 KDELC1Q6UW63 502 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 RASSF6Q6ZTQ3 369 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 COPS6Q7L5N1 327 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 SHFQ7M4L6 423 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MILR1Q7Z6M3 343 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ZC3HC1Q86WB0 502 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 LDHDQ86WU2 507 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ADGRF4Q8IZF3 695 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 LCORLQ8N3X6 602 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 SVOPLQ8N434 492 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PCSK9Q8NBP7 692 aaKnown RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 C11orf65Q8NCR3 313 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TMIEQ8NEW7 156 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PLBD2Q8NHP8 589 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 RDH11Q8TC12 318 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MAPK15Q8TD08 544 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 HEXDCQ8WVB3 486 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 WNT8BQ93098 351 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ELMO3Q96BJ8 720 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 OTULINQ96BN8 352 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 C19orf60Q96EN9 201 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CSPG4P5Q96PW8 444 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 IL22Q9GZX6 179 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 RNF32Q9H0A6 362 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TMEM117Q9H0C3 514 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 DNTTIP1Q9H147 329 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MMP28Q9H239 520 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 DUSP21Q9H596 190 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 C7orf69Q9H7B7 122 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 HEXA-AS1Q9H8Q6 139 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 FOLH1BQ9HBA9 442 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ZNF334Q9HCZ1 680 aaPredicted RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 UBE2TQ9NPD8 197 aaPredicted RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 IL1RAPQ9NPH3 570 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 GKN1Q9NS71 199 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 KRT84Q9NSB2 600 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ANKEF1Q9NU02 776 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 EXD2Q9NVH0 621 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 DZANK1Q9NVP4 752 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 FAM118AQ9NWS6 357 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TMOD3Q9NYL9 352 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 GDE1Q9NZC3 331 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 NDUFAF4Q9P032 175 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 DUX4Q9UBX2 424 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 SLC9A2Q9UBY0 812 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 CYTH4Q9UIA0 394 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 BTNL2Q9UIR0 455 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ADAM28Q9UKQ2 775 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 PNMA8BQ9ULN7 279 aaPredicted RBP5.66□□□□□ -1.5
CD44-225ENST00000527326 DUSP12Q9UNI6 340 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 MGAT4BQ9UQ53 548 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ERVW-1Q9UQF0 538 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CRYL1Q9Y2S2 319 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 TRPV2Q9Y5S1 764 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 ALG5Q9Y673 324 aa5.66□□□□□ -1.5
CD44-225ENST00000527326 CAMTA1Q9Y6Y1 1673 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms