RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CHST9Q7L1S5 443 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 ADGRD2Q7Z7M1 963 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 HIPK1Q86Z02 1210 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 THAP8Q8NA92 274 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 TDRD5Q8NAT2 981 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 TDRD7Q8NHU6 1098 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 SSC4DQ8WTU2 575 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 RFFLQ8WZ73 363 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 ESAMQ96AP7 390 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 RADILQ96JH8 1075 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 APOL2Q9BQE5 337 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 SPATC1LQ9H0A9 340 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 HRH4Q9H3N8 390 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 Q9N2K0 584 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 NLGN3Q9NZ94 848 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 TMED3Q9Y3Q3 217 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 RPL37AP8A6NKH3 93 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 SURF4O15260 269 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 TLX2O43763 284 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 RENP00797 406 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 HOXC4P09017 264 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 ANPEPP15144 967 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 ERVK-16P61578 105 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 SIRPAP78324 504 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PHKG1Q16816 387 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 C9orf66Q5T8R8 295 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 MARC1Q5VT66 337 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 IKBIPQ70UQ0 350 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 ARHGAP22Q7Z5H3 698 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PXKQ7Z7A4 578 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 AACSQ86V21 672 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 IQCHQ86VS3 1027 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 FAM89BQ8N5H3 189 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 OR4D10Q8NGI6 311 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 MORC4Q8TE76 937 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 RBM24Q9BX46 236 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PANK2Q9BZ23 570 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 LRRCC1Q9C099 1032 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PNNQ9H307 717 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 CLEC5AQ9NY25 188 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PDP2Q9P2J9 529 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 ZNF69Q9UC07 566 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 PLAGL1Q9UM63 463 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 CHKBQ9Y259 395 aa1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 WBP11Q9Y2W2 641 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-219ENST00000526299 TRBV5-5A0A0J9YX44 114 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 LNP1A1A4G5 178 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ARHGEF33A8MVX0 844 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ARPC2O15144 300 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 GJA1P17302 382 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 LMO2P25791 158 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ACSL1P33121 698 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ELK3P41970 407 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 CCR3P51677 355 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ARSEP51690 589 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 MAT1AQ00266 395 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 KLC1Q07866 573 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 TRA2AQ13595 282 aaKnown RBP eCLIP1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 TRIM29Q14134 588 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 TTC31Q49AM3 519 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 RNASEH2BQ5TBB1 312 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 TMTC3Q6ZXV5 915 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 FCRLAQ7L513 359 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 VASH2Q86V25 355 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 MMD2Q8IY49 270 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 WDTC1Q8N5D0 677 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 OR4Q3Q8NH05 313 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 OLFM1Q99784 485 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 MUC13Q9H3R2 512 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 PRDM4Q9UKN5 801 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ZNF148Q9UQR1 794 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 GON4LQ3T8J9 2241 aa1.84□□□□□ -2.11
ECHDC1-219ENST00000526299 ERAL1O75616 437 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 KRT33AO76009 404 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 BCL10O95999 233 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 MT-ND1P03886 318 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 PROS1P07225 676 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 GP1BBP13224 206 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 MYOGP15173 224 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 NDST2P52849 883 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 RIPK4P57078 832 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 HNRNPKP61978 463 aaKnown RBP eCLIP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 ACY1Q03154 408 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 KIAA0141Q14154 515 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 SIX1Q15475 284 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 ALDH1L2Q3SY69 923 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 GPR33Q49SQ1 333 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 UTF1Q5T230 341 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 TMUB2Q71RG4 321 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 TMEM173Q86WV6 379 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 RPAP2Q8IXW5 612 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 CPXCR1Q8N123 301 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 HNRNPABQ99729 332 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 FTOQ9C0B1 505 aaKnown RBP eCLIP1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 OPA3Q9H6K4 179 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 KRT84Q9NSB2 600 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 IRAK4Q9NWZ3 460 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 ARHGEF38Q9NXL2 777 aa1.83□□□□□ -2.12
ECHDC1-219ENST00000526299 IGHV3-20A0A0C4DH32 117 aa1.82□□□□□ -2.12
ECHDC1-219ENST00000526299 TMEM221A6NGB7 291 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms