RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 IQCKQ8N0W5 287 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 TCAIMQ8N3R3 496 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
SMPD1-202ENST00000526280 OR8K5Q8NH50 307 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 FGF11Q92914 225 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 ALKBH8Q96BT7 664 aaKnown RBP12.42□□□□□ -0.42
SMPD1-202ENST00000526280 ZNF501Q96CX3 271 aaPredicted RBP12.42□□□□□ -0.42
SMPD1-202ENST00000526280 OR4K3Q96R72 315 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 HAUS8Q9BT25 410 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM109Q9BVC6 243 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 MED4Q9NPJ6 270 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 PCMTD2Q9NV79 361 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 NUDT4Q9NZJ9 180 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 FOXJ2Q9P0K8 574 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 ANKMY1Q9P2S6 941 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 PTBP2Q9UKA9 531 aaKnown RBP12.42□□□□□ -0.42
SMPD1-202ENST00000526280 ACSL6Q9UKU0 697 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 RARRES3Q9UL19 164 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 AHCTF1Q8WYP5 2266 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
SMPD1-202ENST00000526280 APC2O95996 2303 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 ACACAQ13085 2346 aa12.42□□□□□ -0.42
SMPD1-202ENST00000526280 OR2A25A4D2G3 310 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 FOXO6A8MYZ6 492 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 UBXN8O00124 270 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 CTSVO60911 334 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 S100BP04271 92 aaPredicted RBP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 PYGBP11216 843 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 KRT15P19012 456 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 HRH2P25021 359 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 GDF5P43026 501 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 SLC6A12P48065 614 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 DMTNQ08495 405 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 ZC3H12BQ5HYM0 836 aaKnown RBP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 ZNF425Q6IV72 752 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 FBXO42Q6P3S6 717 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 LCA5Q86VQ0 697 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 THOC6Q86W42 341 aaKnown RBP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 PAQR7Q86WK9 346 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 C17orf64Q86WR6 236 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 MCATQ8IVS2 390 aaKnown RBP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 EXT2Q93063 718 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 TSNARE1Q96NA8 513 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 FCRL4Q96PJ5 515 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM79Q9BSE2 394 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 SPRY4Q9C004 299 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 FANCEQ9HB96 536 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 CUEDC1Q9NWM3 386 aaPredicted RBP12.41□□□□□ -0.42
SMPD1-202ENST00000526280 LGALS13Q9UHV8 139 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 SERTAD3Q9UJW9 196 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 PILRAQ9UKJ1 303 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 PLCL2Q9UPR0 1127 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 SH2B3Q9UQQ2 575 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 SLC22A14Q9Y267 594 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 IGF2RP11717 2491 aa12.41□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM8BA6NDV4 472 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 SUPT3HB4E1H0 165 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM150CB9EJG8 249 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 H7BY64 318 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 TLX3O43711 291 aaPredicted RBP12.4□□□□□ -0.42
SMPD1-202ENST00000526280 KLK8O60259 260 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 NRP2O60462 931 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 SUPT3HO75486 399 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 IPO13O94829 963 aaKnown RBP12.4□□□□□ -0.42
SMPD1-202ENST00000526280 CD82P27701 267 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 RELAQ04206 551 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 ST3GAL2Q16842 350 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 FBXO48Q5FWF7 155 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 PWWP2BQ6NUJ5 590 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM151AQ8N4L1 468 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 KDF1Q8NAX2 398 aaPredicted RBP12.4□□□□□ -0.42
SMPD1-202ENST00000526280 ABHD11Q8NFV4 315 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 OR1L3Q8NH93 324 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 PRAP1Q96NZ9 151 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 MRPL57Q9BQC6 102 aaKnown RBP12.4□□□□□ -0.42
SMPD1-202ENST00000526280 CNOT10Q9H9A5 744 aaKnown RBP12.4□□□□□ -0.42
SMPD1-202ENST00000526280 TMEM184CQ9NVA4 438 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 WWOXQ9NZC7 414 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 DCDC2Q9UHG0 476 aa12.4□□□□□ -0.42
SMPD1-202ENST00000526280 DMXL2Q8TDJ6 3036 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 H3BMH7 237 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 STK16O75716 305 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 WDR47O94967 919 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 TIAF1O95411 115 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 CTSBP07858 339 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 GSTA1P08263 222 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 CDH1P12830 882 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 EZRP15311 586 aaKnown RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 HSPA7P48741 367 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 ITGA1P56199 1179 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 CSNK1G2P78368 415 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF844Q08AG5 666 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 DEFB110Q30KQ9 67 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 RNF44Q7L0R7 432 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms