RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GATA6Q92908 595 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 EXT2Q93063 718 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 CD244Q9BZW8 370 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 ASCL3Q9NQ33 180 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 FGF21Q9NSA1 209 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 SLC39A1Q9NY26 324 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 TMEM216Q9P0N5 145 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 GRID1Q9ULK0 1009 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 KCNE2Q9Y6J6 123 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 AKAP13Q12802 2813 aa19.94■□□□□ 0.78
CD44-222ENST00000526025 SPTBP11277 2137 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 CDRT15L2A8MXV6 281 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 COPEO14579 308 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 WDR47O94967 919 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 TNFSF15O95150 251 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 SBK3P0C264 359 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 GFAPP14136 432 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 EZRP15311 586 aaKnown RBP19.93■□□□□ 0.78
CD44-222ENST00000526025 ITIH1P19827 911 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ETV5P41161 510 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ERVPABLB-1P60509 514 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 SH3BP2P78314 561 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 NFKB2Q00653 900 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 TUBB3Q13509 450 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 PCBP2Q15366 365 aaKnown RBP eCLIP19.93■□□□□ 0.78
CD44-222ENST00000526025 CCDC153Q494R4 210 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.93■□□□□ 0.78
CD44-222ENST00000526025 DCAF12Q5T6F0 453 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 FAM20CQ8IXL6 584 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 SLC5A11Q8WWX8 675 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ZNF501Q96CX3 271 aaPredicted RBP19.93■□□□□ 0.78
CD44-222ENST00000526025 APOPT1Q96IL0 206 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ZNF578Q96N58 590 aaPredicted RBP19.93■□□□□ 0.78
CD44-222ENST00000526025 TMEM121BQ9BXQ6 578 aaPredicted RBP19.93■□□□□ 0.78
CD44-222ENST00000526025 STMN4Q9H169 189 aaPredicted RBP19.93■□□□□ 0.78
CD44-222ENST00000526025 FAM60AQ9NP50 221 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 DNAJC11Q9NVH1 559 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 PILRAQ9UKJ1 303 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ACSL6Q9UKU0 697 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 PLCL2Q9UPR0 1127 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 SLC22A14Q9Y267 594 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 DYRK1BQ9Y463 629 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 ACTL7BQ9Y614 415 aa19.93■□□□□ 0.78
CD44-222ENST00000526025 PMS2P1A4D2B8 440 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 FOXO6A8MYZ6 492 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 POLR1CO15160 346 aaPredicted RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 GNAZP19086 355 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 TAC1P20366 129 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 CD82P27701 267 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 HSPA7P48741 367 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 YBX1P67809 324 aaKnown RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 PCDH1Q08174 1060 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 CDC16Q13042 620 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 KCNAB1Q14722 419 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 PFKFB4Q16877 469 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 SRRM1Q8IYB3 904 aaKnown RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 C4orf33Q8N1A6 199 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 BANPQ8N9N5 519 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 OR4K1Q8NGD4 311 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 RDH11Q8TC12 318 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 OR6C1Q96RD1 312 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 SMC6Q96SB8 1091 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 RUFY1Q96T51 708 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 SARGQ9BW04 601 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 KLHL25Q9H0H3 589 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 EHD1Q9H4M9 534 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 VIPAS39Q9H9C1 493 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 PELI2Q9HAT8 420 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 SSU72Q9NP77 194 aaKnown RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 THSD1Q9NS62 852 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 CUEDC1Q9NWM3 386 aaPredicted RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 CPSF2Q9P2I0 782 aaKnown RBP19.92■□□□□ 0.78
CD44-222ENST00000526025 RARRES3Q9UL19 164 aa19.92■□□□□ 0.78
CD44-222ENST00000526025 AHCTF1Q8WYP5 2266 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 K7EPI3 171 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 BRINP1O60477 761 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 PIK3CGP48736 1102 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 MAPK10P53779 464 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 FOXM1Q08050 763 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 C18orf21Q32NC0 220 aaPredicted RBP19.91■□□□□ 0.78
CD44-222ENST00000526025 HDXQ7Z353 690 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 PPP1R3BQ86XI6 285 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 NEIL2Q969S2 332 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 THAP11Q96EK4 314 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 ZNF285Q96NJ3 590 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 ZFYVE21Q9BQ24 234 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 C1QTNF3Q9BXJ4 246 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 ABCF3Q9NUQ8 709 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 MID2Q9UJV3 735 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 EMCNQ9ULC0 261 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 SH2B3Q9UQQ2 575 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 KLHL20Q9Y2M5 609 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 AK5Q9Y6K8 562 aa19.91■□□□□ 0.78
CD44-222ENST00000526025 SDK2Q58EX2 2172 aa19.9■□□□□ 0.78
CD44-222ENST00000526025 C9orf172C9J069 976 aa19.9■□□□□ 0.78
CD44-222ENST00000526025 SRPX2O60687 465 aaPredicted RBP19.9■□□□□ 0.78
CD44-222ENST00000526025 PRAMEF10O60809 474 aa19.9■□□□□ 0.78
CD44-222ENST00000526025 CTSVO60911 334 aa19.9■□□□□ 0.78
CD44-222ENST00000526025 PROCP04070 461 aa19.9■□□□□ 0.78
CD44-222ENST00000526025 MYZAPP0CAP1 466 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms