RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	SHB	Q15464	509 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	IQCC	Q4KMZ1	466 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	FASTKD1	Q53R41	847 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TAF1B	Q53T94	588 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNF789	Q5FWF6	425 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ARL13A	Q5H913	290 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	AADACL2	Q6P093	401 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PODNL1	Q6PEZ8	512 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	AFTPH	Q6ULP2	937 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC36A4	Q6YBV0	504 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	NUDT13	Q86X67	352 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	MCEMP1	Q8IX19	187 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	BATF2	Q8N1L9	274 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PNPLA1	Q8N8W4	532 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	L3MBTL4	Q8NA19	623 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SRFBP1	Q8NEF9	429 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ABHD11	Q8NFV4	315 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	OR14L1P	Q8NHC6	308 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ARHGAP45	Q92619	1136 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CASP10	Q92851	521 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	MAP4K1	Q92918	833 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SLAMF9	Q96A28	289 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	RSPRY1	Q96DX4	576 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CNOT6L	Q96LI5	555 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM68	Q96MH6	324 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNF560	Q96MR9	790 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	LRRC3B	Q96PB8	259 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PAIP2	Q9BPZ3	127 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNF577	Q9BSK1	485 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CARD6	Q9BX69	1037 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CIPC	Q9C0C6	399 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	S1PR5	Q9H228	398 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	RIBC2	Q9H4K1	309 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	RNPEPL1	Q9HAU8	725 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	GLOD4	Q9HC38	313 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CRLF2	Q9HC73	371 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	CD209	Q9NNX6	404 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TRPV5	Q9NQA5	729 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	GLRX2	Q9NS18	164 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SMPD3	Q9NY59	655 aa	Predicted RBP	4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	SPG21	Q9NZD8	308 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	DNAJB4	Q9UDY4	337 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	IL17B	Q9UHF5	180 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	TRAF3IP3	Q9Y228	551 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	NUDC	Q9Y266	331 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PLEKHA6	Q9Y2H5	1048 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	FAM96B	Q9Y3D0	163 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	NAALAD2	Q9Y3Q0	740 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	PIEZO1	Q92508	2521 aa		4.15	□□□□□ -1.75
PCM1-223	ENST00000524356	KDM3B	Q7LBC6	1761 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356		A0A0A0MQY5	61 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	C2orf92	A0A1B0GVN3	265 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	LINC00854	A0A1B0GVQ3	168 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356		A0A1B0GWJ7	208 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	TCRBV7S3A2	A0A539	114 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	C1orf226	A1L170	272 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CFAP73	A6NFT4	308 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	TCP10L2	B9ZVM9	353 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	MCIDAS	D6RGH6	385 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356		F8WDY8	70 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	PSMD9	O00233	223 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ENO1	P06733	434 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	FGF2	P09038	288 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	PFKFB1	P16118	471 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	LBP	P18428	481 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	GLRA2	P23416	452 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	FPR3	P25089	353 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	NDUFS1	P28331	727 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CCND2	P30279	289 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	WNT5A	P41221	380 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CLCNKB	P51801	687 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	GPR143	P51810	404 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	JAK3	P52333	1124 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ADPRH	P54922	357 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	UBE2H	P62256	183 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	TFAP4	Q01664	338 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SPOCK1	Q08629	439 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CCDC15	Q0P6D6	951 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	OVGP1	Q12889	678 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	PTPRCAP	Q14761	206 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CFAP221	Q4G0U5	840 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	OR6B2	Q6IFH4	312 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ZBTB49	Q6ZSB9	765 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	NOXA1	Q86UR1	476 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CAMK1D	Q8IU85	385 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SIAH3	Q8IW03	269 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	TDH	Q8IZJ6	230 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CCNY	Q8ND76	341 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	RAET1E	Q8TD07	263 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	METTL21A	Q8WXB1	218 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.14	□□□□□ -1.75

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