RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TRMT6Q9UJA5 497 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-240ENST00000523912 C3orf18Q9UK00 162 aa8.47□□□□□ -1.05
CTNNA1-240ENST00000523912 MAU2Q9Y6X3 613 aa8.47□□□□□ -1.05
CTNNA1-240ENST00000523912 HIVEP3Q5T1R4 2406 aa8.46□□□□□ -1.05
CTNNA1-240ENST00000523912 CACNA1DQ01668 2161 aa8.46□□□□□ -1.05
CTNNA1-240ENST00000523912 POLEQ07864 2286 aa8.46□□□□□ -1.05
CTNNA1-240ENST00000523912 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.05
CTNNA1-240ENST00000523912 A0A1W2PPV9 198 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 H0YGG7 62 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SMAPO00193 183 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 EIF3FO00303 357 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SOCS6O14544 535 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ZSCAN12O43309 604 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ZBTB14O43829 449 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 KIF5CO60282 957 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 MPC1LP0DKB6 136 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ERGP11308 486 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PGAM1P18669 254 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 FDXRP22570 491 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 HRH2P25021 359 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 CXCR2P25025 360 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SLC1A2P43004 574 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 RGS4P49798 205 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 CLCN7P51798 805 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ARF3P61204 181 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 DSG2Q14126 1118 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 FASTKQ14296 549 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 NDUFA9Q16795 377 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PRR30Q53SZ7 412 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ANKRD22Q5VYY1 191 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ICE2Q659A1 982 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 TTC27Q6P3X3 843 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SHISA6Q6ZSJ9 500 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 CENPUQ71F23 418 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 COX15Q7KZN9 410 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 CAND1Q86VP6 1230 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 REXO1L1PQ8IX06 675 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PALM2Q8IXS6 379 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PPIL6Q8IXY8 311 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 FBXO15Q8NCQ5 510 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 OR2A1Q8NGT9 310 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PPP4R1Q8TF05 950 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 INPP5DQ92835 1189 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 CNDP1Q96KN2 507 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PKP4Q99569 1192 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 LHPPQ9H008 270 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PCBD2Q9H0N5 130 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 ZNF552Q9H707 407 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 FBXO6Q9NRD1 293 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 IGSF5Q9NSI5 407 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 HS3ST3B1Q9Y662 390 aa8.46□□□□□ -1.06
CTNNA1-240ENST00000523912 SHANK1Q9Y566 2161 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 LOC105369274A0A096LPK9 316 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 NSG1A0A0A6YYJ2 146 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 LOC102723532A0A0G2JNH3 316 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 WIPF3A6NGB9 483 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 VSTM2BA6NLU5 285 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 TCP11X1B4DZS4 312 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 TTC4O95801 387 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 SLC16A8O95907 504 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 HPP00738 406 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 ZGLP1P0C6A0 271 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 AVPR1BP47901 424 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 FOXL2P58012 376 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 RELAQ04206 551 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PRDX1Q06830 199 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 KLC1Q07866 573 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 SP140Q13342 867 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 CUL1Q13616 776 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 TLR1Q15399 786 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 NR6A1Q15406 480 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 CYP1B1Q16678 543 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PRTGQ2VWP7 1150 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PLEKHN1Q494U1 663 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 B3GNTL1Q67FW5 361 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 FRMPD2BQ6IN97 320 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 SUSD1Q6UWL2 747 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 KIRREL2Q6UWL6 708 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 ISLR2Q6UXK2 745 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 Q6ZS92 163 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 UBE2R2Q712K3 238 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PCGF5Q86SE9 256 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 KCNMB4Q86W47 210 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PAQR7Q86WK9 346 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 DENND6AQ8IWF6 608 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 KBTBD2Q8IY47 623 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PRSS58Q8IYP2 241 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 OR4N4Q8N0Y3 316 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 CISD2Q8N5K1 135 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 OR11G2Q8NGC1 345 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 STT3BQ8TCJ2 826 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 MCOLN3Q8TDD5 553 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 ACTRT1Q8TDG2 376 aa8.45□□□□□ -1.06
CTNNA1-240ENST00000523912 ASB11Q8WXH4 323 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms