RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GLE1Q53GS7 698 aaKnown RBP19.77■□□□□ 0.76
TRIM35-203ENST00000521253 FAM69BQ5VUD6 431 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF425Q6IV72 752 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 AGTRAPQ6RW13 159 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 SYVN1Q86TM6 617 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 OR4N4Q8N0Y3 316 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 NKAPQ8N5F7 415 aaKnown RBP19.77■□□□□ 0.76
TRIM35-203ENST00000521253 ANKRD49Q8WVL7 239 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 RBBP8Q99708 897 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 ZFYVE21Q9BQ24 234 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 FAM117AQ9C073 453 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 CAB39LQ9H9S4 337 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 POPDC3Q9HBV1 291 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 GPAMQ9HCL2 828 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 ARL15Q9NXU5 204 aa19.77■□□□□ 0.76
TRIM35-203ENST00000521253 FITM1A5D6W6 292 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 CDC7O00311 574 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 ATXN8OSP0DMR3 200 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 ARSFP54793 590 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 SLC12A2P55011 1212 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 AP1S2P56377 157 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 DCDP81605 110 aaKnown RBP19.76■□□□□ 0.75
TRIM35-203ENST00000521253 NAE1Q13564 534 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 IL10RAQ13651 578 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 GRM7Q14831 915 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 NCF4Q15080 339 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 ZXDCQ2QGD7 858 aaPredicted RBP19.76■□□□□ 0.75
TRIM35-203ENST00000521253 WASHC2DQ5SRD0 308 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 PRAMEF13Q5VWM6 474 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 SBSNQ6UWP8 590 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 TTLL10Q6ZVT0 673 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 PPM1NQ8N819 430 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 MED8Q96G25 268 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 GPR22Q99680 433 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 FAM129AQ9BZQ8 928 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 SYNPO2LQ9H987 977 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 CUEDC1Q9NWM3 386 aaPredicted RBP19.76■□□□□ 0.75
TRIM35-203ENST00000521253 MTRF1LQ9UGC7 380 aaKnown RBP19.76■□□□□ 0.75
TRIM35-203ENST00000521253 SNX7Q9UNH6 387 aa19.76■□□□□ 0.75
TRIM35-203ENST00000521253 PABPN1LA6NDY0 278 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 NPEPPSL1A6NEC2 478 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 C9J4A7 227 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 FAM155BO75949 473 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 C1QL1O75973 258 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 WISP3O95389 354 aaPredicted RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 EIF2S1P05198 315 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 ENO2P09104 434 aaPredicted RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 ALAS2P22557 587 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 USP10Q14694 798 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 SLC9A5Q14940 896 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 EFTUD2Q15029 972 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 PPP1R3AQ16821 1122 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 UGT8Q16880 541 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 NKAIN1Q4KMZ8 207 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 YOD1Q5VVQ6 348 aaPredicted RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 ADCK2Q7Z695 626 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 CEP112Q8N8E3 955 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 TTC29Q8NA56 475 aaPredicted RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 IFT81Q8WYA0 676 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 ANKRD7Q92527 254 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 ALKBH8Q96BT7 664 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 SGPP1Q9BX95 441 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 TRIM54Q9BYV2 358 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 PCBD2Q9H0N5 130 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 CUTCQ9NTM9 273 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 UTP6Q9NYH9 597 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 TCFL5Q9UL49 500 aa19.75■□□□□ 0.75
TRIM35-203ENST00000521253 NOVA2Q9UNW9 492 aaKnown RBP19.75■□□□□ 0.75
TRIM35-203ENST00000521253 A0A1B0GX78 115 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 H0YGG7 62 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 H7BY64 318 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 HAT1O14929 419 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 GUCA1CO95843 209 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 EZRP15311 586 aaKnown RBP19.74■□□□□ 0.75
TRIM35-203ENST00000521253 ITGAXP20702 1163 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 ECHS1P30084 290 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 SPRP35270 261 aaPredicted RBP19.74■□□□□ 0.75
TRIM35-203ENST00000521253 CCR10P46092 362 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 ARF3P61204 181 aaPredicted RBP19.74■□□□□ 0.75
TRIM35-203ENST00000521253 GRTP1Q5TC63 336 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 MLIPQ5VWP3 458 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 FBXL8Q96CD0 374 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 TSPAN17Q96FV3 270 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 PRAP1Q96NZ9 151 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 OR2A5Q96R48 311 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 C17orf62Q9BQA9 187 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 NINJ2Q9NZG7 142 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 IFT80Q9P2H3 777 aaPredicted RBP19.74■□□□□ 0.75
TRIM35-203ENST00000521253 NDOR1Q9UHB4 597 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 SH2B3Q9UQQ2 575 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 POLHQ9Y253 713 aa19.74■□□□□ 0.75
TRIM35-203ENST00000521253 TLN1Q9Y490 2541 aaKnown RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 DSCR3O14972 297 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 PHGDHO43175 533 aaKnown RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 MED26O95402 600 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 CCND1P24385 295 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 POLE2P56282 527 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 RELAQ04206 551 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 NAB1Q13506 487 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 FAM214AQ32MH5 1076 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms