RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 C1GALT1C1LP0DN25 315 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 HOXB3P14651 431 aaPredicted RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 EZRP15311 586 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 CD82P27701 267 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 HPDP32754 393 aaPredicted RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 CSTF2P33240 577 aaKnown RBP eCLIP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 AHRP35869 848 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 GMPRP36959 345 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 HNF4AP41235 474 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 GRIA3P42263 894 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 CCR8P51685 355 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ARFIP1P53367 373 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 GFERP55789 205 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 RAB15P59190 212 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 MAGOHP61326 146 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 RPS15AP62244 130 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 GTF2H2Q13888 395 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 IL11RAQ14626 422 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCLAFQ15004 111 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PFKFB4Q16877 469 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 HSP90B2PQ58FF3 399 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PAGE2BQ5JRK9 111 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TCTE1Q5JU00 501 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZNF678Q5SXM1 525 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 THEMIS2Q5TEJ8 643 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 NKAIN2Q5VXU1 208 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 NIPAL1Q6NVV3 410 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 GTF2H2CQ6P1K8 395 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TLDC1Q6P9B6 456 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 FIGLAQ6QHK4 219 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 NXPE4Q6UWF7 544 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 DHRS13Q6UX07 377 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 MBOAT1Q6ZNC8 495 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 RNF165Q6ZSG1 346 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 RNF44Q7L0R7 432 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PAQR7Q86WK9 346 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 FAM129CQ86XR2 697 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 LSMEM2Q8N112 164 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 DNAJC22Q8N4W6 341 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ARFGAP2Q8N6H7 521 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 C19orf47Q8N9M1 422 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 L3MBTL4Q8NA19 623 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TTLQ8NG68 377 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 WDR36Q8NI36 951 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PTCD3Q96EY7 689 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 MED8Q96G25 268 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 CNDP1Q96KN2 507 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZNF285Q96NJ3 590 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TGM7Q96PF1 710 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 FAM111AQ96PZ2 611 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TEFMQ96QE5 360 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 MAP3K3Q99759 626 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 AIF1LQ9BQI0 150 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PLCD4Q9BRC7 762 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 NUDT22Q9BRQ3 303 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 DPH7Q9BTV6 452 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 EFCAB11Q9BUY7 163 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 DDA1Q9BW61 102 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 FAM117AQ9C073 453 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 NKIRAS1Q9NYS0 192 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 TSR3Q9UJK0 312 aaKnown RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PILRAQ9UKJ1 303 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCTPQ9UKL6 214 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 ATXN7L1Q9ULK2 861 aaPredicted RBP6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PLAGL1Q9UM63 463 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PLCL2Q9UPR0 1127 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 SLC22A14Q9Y267 594 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCDHGA8Q9Y5G5 932 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCDHGA3Q9Y5H0 932 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 SPTBN4Q9H254 2564 aa6.12□□□□□ -1.43
IGHV4-55-201ENST00000520889 IGHV5-51A0A0C4DH38 117 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 IGKV1-8A0A0C4DH67 115 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 TMEM120BA0PK00 339 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 SERTM1A2A2V5 107 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 NCF1BA6NI72 391 aaPredicted RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 SLC9B1P1A6NJY1 282 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 NCF1CA8MVU1 366 aaPredicted RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 FOXO6A8MYZ6 492 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 TMEM114B3SHH9 223 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 H0YIV9 168 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 KLF11O14901 512 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 GIPC1O14908 333 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 CSO75390 466 aaKnown RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 SPAG7O75391 227 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 DXOO77932 396 aaKnown RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 TOP3BO95985 862 aaKnown RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 OTCP00480 354 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 ENO1P06733 434 aaKnown RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 FGF4P08620 206 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 HBQ1P09105 142 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 FGF5P12034 268 aa6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 NCF1P14598 390 aaPredicted RBP6.11□□□□□ -1.43
IGHV4-55-201ENST00000520889 JUPP14923 745 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms