RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 NUP107P57740 925 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 EPS8Q12929 822 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 SP140Q13342 867 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 PARS2Q7L3T8 475 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 R3HCC1LQ7Z5L2 792 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 CLECL1Q8IZS7 167 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 GLMNQ92990 594 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 EXOSC8Q96B26 276 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 ALG14Q96F25 216 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 PAIP1Q9H074 479 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 CXorf21Q9HAI6 301 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TPT1P8Q9HAU6 139 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 HEBP1Q9NRV9 189 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 KRT84Q9NSB2 600 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TMCC3Q9ULS5 477 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 FZD4Q9ULV1 537 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TESMINQ9Y4I5 508 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ISM1B1AKI9 464 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 PI15O43692 258 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 OR1F1O43749 312 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TRMUO75648 421 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 HNRNPA1P09651 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
MCF2-209ENST00000520602 MPC1LP0DKB6 136 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 BMP2P12643 396 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 C6P13671 934 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 IFNA8P32881 189 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 RFX3P48380 749 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 LBX1P52954 281 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ARSFP54793 590 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 CLDN8P56748 225 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 MYBPC1Q00872 1141 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 CSTF3Q12996 717 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 NFE2L1Q14494 772 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 DUOXA1Q1HG43 343 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 FAM180BQ6P0A1 224 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TRIM40Q6P9F5 258 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 LIPIQ6XZB0 460 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 GALNT15Q8N3T1 639 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 PACRGLQ8N7B6 248 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ANKFN1Q8N957 763 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ZNF784Q8NCA9 323 aaPredicted RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 C11orf65Q8NCR3 313 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 SETD9Q8NE22 299 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 OR8J3Q8NGG0 315 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 RORBQ92753 470 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 COL26A1Q96A83 441 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 MUS81Q96NY9 551 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ARMC7Q9H6L4 198 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ARMC1Q9NVT9 282 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 GPRC5BQ9NZH0 403 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TAC3Q9UHF0 121 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 RALGAPA2Q2PPJ7 1873 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 FABP3P05413 133 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HSMCR30P0CW71 290 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 JUPP14923 745 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 JAK1P23458 1154 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 CXCR2P25025 360 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 MAPK12P53778 367 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ATAT1Q5SQI0 421 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 KCTD8Q6ZWB6 473 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 SPPL3Q8TCT6 385 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 C12orf66Q96MD2 445 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 AIF1LQ9BQI0 150 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 NTMT1Q9BV86 223 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PHPT1Q9NRX4 125 aaPredicted RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 PCDHA9Q9Y5H5 950 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 STK25O00506 426 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 BCL10O95999 233 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 FESP07332 822 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 SSR2P43308 183 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 SPIBQ01892 262 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ABHD18Q0P651 414 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 ATP6AP1Q15904 470 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 DPY19L1Q2PZI1 675 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ADCK1Q86TW2 530 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HIPK1Q86Z02 1210 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PLD3Q8IV08 490 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HS3ST5Q8IZT8 346 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 RASGEF1AQ8N9B8 481 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ZNF540Q8NDQ6 660 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HUS1BQ8NHY5 278 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ZNF514Q96K75 400 aaPredicted RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 PKP4Q99569 1192 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 SLC2A11Q9BYW1 496 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 BRINP2Q9C0B6 783 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 GIMAP4Q9NUV9 329 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 SAGE1Q9NXZ1 904 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 STOX2Q9P2F5 926 aaPredicted RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 TMED5Q9Y3A6 229 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 NUMA1Q14980 2115 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 TMEM202A6NGA9 273 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 FXYD1O00168 92 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 NUAK1O60285 661 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 DNTTP04053 509 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 CYP17A1P05093 508 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms