RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 RABL3Q5HYI8 236 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ZC3H12BQ5HYM0 836 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 PITRM1Q5JRX3 1037 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FAM219BQ5XKK7 198 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ATG9BQ674R7 924 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 GLYATQ6IB77 296 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 KRT80Q6KB66 452 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 RETSATQ6NUM9 610 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 IL27RAQ6UWB1 636 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ABRAXAS1Q6UWZ7 409 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TPGS1Q6ZTW0 290 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FRA10AC1Q70Z53 315 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 LRRC70Q7Z2Q7 622 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ANKRD33Q7Z3H0 272 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 THAP5Q7Z6K1 395 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 MILR1Q7Z6M3 343 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ITIH5Q86UX2 942 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SLC39A11Q8N1S5 342 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NXPE1Q8N323 547 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SVOPLQ8N434 492 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CPA6Q8N4T0 437 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 DHRSXQ8N5I4 330 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ZBTB2Q8N680 514 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CDYL2Q8N8U2 506 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SCAIQ8N9R8 606 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 L3MBTL4Q8NA19 623 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FAM47BQ8NA70 645 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 FIBINQ8TAL6 211 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FAM110BQ8TC76 370 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 METTL6Q8TCB7 284 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 LKAAEAR1Q8TD35 194 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SLC13A3Q8WWT9 602 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 GTF2H4Q92759 462 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 VPS33AQ96AX1 596 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PPWD1Q96BP3 646 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 TESCQ96BS2 214 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ULK4Q96C45 1275 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 MPP4Q96JB8 637 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 EXOC2Q96KP1 924 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NSMCE2Q96MF7 247 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ZNF583Q96ND8 569 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 SMIM14Q96QK8 99 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ACOX2Q99424 681 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 OSBPL10Q9BXB5 764 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 UGT2B28Q9BY64 529 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CPEB1Q9BZB8 566 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 GPR63Q9BZJ6 419 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CLPBQ9H078 707 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 CLMPQ9H6B4 373 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NTN4Q9HB63 628 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 IL26Q9NPH9 171 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 TLR9Q9NR96 1032 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.92□□□□□ -1.62
SDC2-204ENST00000519914 GKN1Q9NS71 199 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 ABCB8Q9NUT2 735 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 INTS7Q9NVH2 962 aaKnown RBP4.92□□□□□ -1.62
SDC2-204ENST00000519914 KCTD5Q9NXV2 234 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 IL20Q9NYY1 176 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 FAM8A1Q9UBU6 413 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 OAZ3Q9UMX2 235 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 NAALAD2Q9Y3Q0 740 aa4.92□□□□□ -1.62
SDC2-204ENST00000519914 PCNTO95613 3336 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 A0A096LPI6 279 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 GLYATL1P3A0A0U1RQE8 302 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 TSPAN11A1L157 253 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 C2orf78A6NCI8 922 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 SAC3D1A6NKF1 404 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 B8ZZF3 427 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 NT5C1B-RDH14C9J2C7 533 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 E9PQ18 207 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 H0Y626 953 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 H3BSA7 217 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 MANBAO00462 879 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 EI24O14681 340 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 CLOCKO15516 846 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 IDH3BO43837 385 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 TSPAN3O60637 253 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 UGDHO60701 494 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 ERN1O75460 977 aaKnown RBP4.91□□□□□ -1.62
SDC2-204ENST00000519914 SLC25A14O95258 325 aaPredicted RBP4.91□□□□□ -1.62
SDC2-204ENST00000519914 KCNH1O95259 989 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 IGSF6O95976 241 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 ALPLP05186 524 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 PGRP06401 933 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 C8GP07360 202 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 INHBBP09529 407 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 MBL2P11226 248 aaPredicted RBP4.91□□□□□ -1.62
SDC2-204ENST00000519914 CDK4P11802 303 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 ETS2P15036 469 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 ATP6V1B1P15313 513 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 EPORP19235 508 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 HMOX2P30519 316 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 CA5AP35218 305 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 HOXD12P35452 270 aa4.91□□□□□ -1.62
SDC2-204ENST00000519914 HNF1BP35680 557 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms